Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5M7T

Structure of human O-GlcNAc hydrolase with PugNAc type inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0004415molecular_functionhyalurononglucosaminidase activity
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006044biological_processN-acetylglucosamine metabolic process
A0006493biological_processprotein O-linked glycosylation
A0006516biological_processglycoprotein catabolic process
A0006517biological_processprotein deglycosylation
A0008152biological_processmetabolic process
A0009100biological_processglycoprotein metabolic process
A0016020cellular_componentmembrane
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0042802molecular_functionidentical protein binding
A0102166molecular_functionobsolete [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine O-N-acetyl-alpha-D-glucosaminase activity
A0102167molecular_functionobsolete [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine O-N-acetyl-alpha-D-glucosaminase activity
A0102571molecular_function[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity
A1901135biological_processcarbohydrate derivative metabolic process
B0004415molecular_functionhyalurononglucosaminidase activity
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006044biological_processN-acetylglucosamine metabolic process
B0006493biological_processprotein O-linked glycosylation
B0006516biological_processglycoprotein catabolic process
B0006517biological_processprotein deglycosylation
B0008152biological_processmetabolic process
B0009100biological_processglycoprotein metabolic process
B0016020cellular_componentmembrane
B0016231molecular_functionbeta-N-acetylglucosaminidase activity
B0016787molecular_functionhydrolase activity
B0016798molecular_functionhydrolase activity, acting on glycosyl bonds
B0042802molecular_functionidentical protein binding
B0102166molecular_functionobsolete [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine O-N-acetyl-alpha-D-glucosaminase activity
B0102167molecular_functionobsolete [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine O-N-acetyl-alpha-D-glucosaminase activity
B0102571molecular_function[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity
B1901135biological_processcarbohydrate derivative metabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue GDV A 1001
ChainResidue
AGLY67
AASN280
AASP285
AASN313
APHE68
ALYS98
AASP174
AASP175
ATYR219
APHE223
AVAL254
ATRP278

site_idAC2
Number of Residues11
Detailsbinding site for residue GDV B 1001
ChainResidue
BGLY67
BPHE68
BLYS98
BASP174
BASP175
BTYR219
BVAL254
BTRP278
BASN280
BASP285
BASN313

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor => ECO:0000255|PROSITE-ProRule:PRU01353, ECO:0000305|PubMed:16533067
ChainResidueDetails
AASP175
BASP175

site_idSWS_FT_FI2
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|PubMed:28939839, ECO:0007744|PDB:5VVT
ChainResidueDetails
AGLY67
BASP174
BASP175
BTYR219
BASP285
BASN313
ALYS98
AASP174
AASP175
ATYR219
AASP285
AASN313
BGLY67
BLYS98

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Cleavage; by caspase-3 => ECO:0000269|PubMed:18586680
ChainResidueDetails
AASP413
BASP413

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER364
BSER364

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon