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4MDF

Structure of bacterial polynucleotide kinase Michaelis complex bound to GTP and DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0002098biological_processtRNA wobble uridine modification
A0006357biological_processregulation of transcription by RNA polymerase II
B0002098biological_processtRNA wobble uridine modification
B0006357biological_processregulation of transcription by RNA polymerase II
Functional Information from PDB Data
site_idAC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE GTP A 1001
ChainResidue
ASER16
AARG116
AARG120
AARG123
AMG1002
AHOH1101
AHOH1102
AHOH1103
AHOH1155
AHOH1156
AHOH1186
ASER17
AHOH1211
CDC1
AGLY18
ASER19
AGLY20
ALYS21
ASER22
ATHR23
AASN38

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1002
ChainResidue
ASER22
AGTP1001
AHOH1101
AHOH1102
AHOH1103

site_idAC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE CIT A 1003
ChainResidue
AHIS62
ATYR63
ASER66
AGLU92
AILE93
AHOH1151
AHOH1167
AHOH1231
AHOH1243
AHOH1271
CDG4
CDT5

site_idAC4
Number of Residues21
DetailsBINDING SITE FOR RESIDUE GTP B 1001
ChainResidue
BSER16
BSER17
BGLY18
BSER19
BGLY20
BLYS21
BSER22
BTHR23
BASN38
BARG116
BARG120
BARG123
BMG1002
BHOH1101
BHOH1102
BHOH1103
BHOH1149
BHOH1169
BHOH1197
BHOH1200
DDC1

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 1002
ChainResidue
BSER22
BGTP1001
BHOH1101
BHOH1102
BHOH1103

218853

PDB entries from 2024-04-24

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