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4JKB

Open and closed forms of V1788D human PRP8 RNase H-like domain with bound Mg ion

Functional Information from GO Data
ChainGOidnamespacecontents
A0000398biological_processmRNA splicing, via spliceosome
A0005681cellular_componentspliceosomal complex
B0000398biological_processmRNA splicing, via spliceosome
B0005681cellular_componentspliceosomal complex
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 2001
ChainResidue
AGLU1911
APRO1912
AHOH2193
AHOH2253
AHOH2283
AHOH2366
BLYS1908
BGLN1913

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 2002
ChainResidue
APHE1818
ALEU1852
AGLU1856
AHOH2153
AHOH2198
BGLN1816
BLEU1852
AGLN1816

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 2003
ChainResidue
AGLY1867
AHOH2446
BHOH2336

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 2004
ChainResidue
AARG1865
ALYS1866
AHOH2291
AHOH2446

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 2005
ChainResidue
AARG1941
AHOH2248
AHOH2260

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2001
ChainResidue
BASP1781
BHOH2219
BHOH2220
BHOH2249
BHOH2305
BHOH2370

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2002
ChainResidue
AGLU1856
AHOH2302
AHOH2413
BGLU1856
BHOH2218
BHOH2342

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL B 2003
ChainResidue
BGLU1855
BHOH2213
BHOH2365

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 2004
ChainResidue
BTHR1824
BLEU1836
BALA1837

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 2005
ChainResidue
BSER1825
BLYS1840
BHOH2323

219140

PDB entries from 2024-05-01

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