4JKB

Open and closed forms of V1788D human PRP8 RNase H-like domain with bound Mg ion

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	CLSI BEAMLINE 08B1-1
Synchrotron site	CLSI
Beamline	08B1-1
Temperature [K]	100
Detector technology	CCD
Collection date	2013-02-25
Detector	MARMOSAIC 300 mm CCD
Wavelength(s)	0.97949
Spacegroup name	P 21 21 21
Unit cell lengths	75.355, 78.159, 93.766
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	40.040 - 1.300
R-factor	0.1207
Rwork	0.119
R-free	0.14530
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	3enb
RMSD bond length	0.011
RMSD bond angle	1.442
Data reduction software	DENZO
Data scaling software	SCALEPACK
Phasing software	REFMAC (5.6.0117)
Refinement software	REFMAC

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	50.000	50.000	1.350
High resolution limit [Å]	1.300	2.800	1.300
Rmerge	0.041	0.027	0.568
Number of reflections	135702
<I/σ(I)>	13.3
Completeness [%]	99.4	94.5	100
Redundancy	5.5	5.2	5.4

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION	7.5	298	15% PEG 4000, 300mM MgCl2, 100mM Tris, pH 7.5, vapor diffusion, temperature 298K