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4E6I

Crystal structure of Staphylococcal nuclease variant NVIAGA V99G at cryogenic temperature

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004518molecular_functionnuclease activity
B0003676molecular_functionnucleic acid binding
B0004518molecular_functionnuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 A 201
ChainResidue
AARG35
AARG87
AHOH343
BLYS71

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MPD B 201
ChainResidue
ALYS134
BGLU10
BTYR27
BPHE76

Functional Information from PROSITE/UniProt
site_idPS01284
Number of Residues11
DetailsTNASE_2 Thermonuclease family signature 2. DKYGRgLAyIY
ChainResidueDetails
AASP83-TYR93

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: ACT_SITE => ECO:0000269|PubMed:288045
ChainResidueDetails
AARG35
AGLU43
AARG87
BARG35
BGLU43
BARG87

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING:
ChainResidueDetails
BASP40
BILE41
AASN21
AASP40
AILE41
BASN21

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 165
ChainResidueDetails
AASN21metal ligand
AARG35electrostatic stabiliser, hydrogen bond donor
AASP40metal ligand
AILE41metal ligand
AGLU43hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AARG87electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA2
Number of Residues6
DetailsM-CSA 165
ChainResidueDetails
BASN21metal ligand
BARG35electrostatic stabiliser, hydrogen bond donor
BASP40metal ligand
BILE41metal ligand
BGLU43hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BARG87electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

221051

PDB entries from 2024-06-12

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