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3THO

Crystal structure of Mre11:Rad50 in its ATP/ADP bound state

Functional Information from GO Data
ChainGOidnamespacecontents
A0006302biological_processdouble-strand break repair
A0016887molecular_functionATP hydrolysis activity
B0003677molecular_functionDNA binding
B0004519molecular_functionendonuclease activity
B0004520molecular_functionDNA endonuclease activity
B0004527molecular_functionexonuclease activity
B0004529molecular_functionDNA exonuclease activity
B0005515molecular_functionprotein binding
B0006259biological_processDNA metabolic process
B0006260biological_processDNA replication
B0006281biological_processDNA repair
B0006302biological_processdouble-strand break repair
B0006310biological_processDNA recombination
B0008408molecular_function3'-5' exonuclease activity
B0016787molecular_functionhydrolase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues24
DetailsBINDING SITE FOR RESIDUE ADP A 1452
ChainResidue
ALEU12
ASER38
AARG53
ATYR54
AASP59
AVAL61
AASN62
AARG63
AARG741
AARG762
AGLY766
AGLY13
ASER768
AGLU798
AMG853
AHOH864
AHOH873
APRO31
AASN32
AGLY33
AALA34
AGLY35
ALYS36
ASER37

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 853
ChainResidue
ASER37
ASER768
AGLY769
AGLU798
AHOH876
AADP1452

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 854
ChainResidue
ASER57
AHIS96

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 855
ChainResidue
AARG71
AILE86
ALYS99

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 856
ChainResidue
AALA113
AALA114
ASER118

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 857
ChainResidue
APHE21
AGLN22
AGLY24
AILE25
ATHR26
AVAL824
AILE825
AVAL826
AARG840

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 858
ChainResidue
ASER166
AARG790

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 A 859
ChainResidue
AGLU798
ASER801
ATHR829
ACYS830

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN B 1
ChainResidue
BASP14
BHIS16
BASP58
BGLN94
BHIS216
BHIS218

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MN B 2
ChainResidue
BASP58
BASN93
BHIS180
BHIS216

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 386
ChainResidue
BSO44
BMET7
BGLN130
BLYS255
BHOH393

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 4
ChainResidue
BARG128
BGLU253
BLYS255
BSO4386

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 5
ChainResidue
BTRP22
BTHR23
BSER24
BLYS322

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 387
ChainResidue
AARG63
AILE760
AGLU761
BGLU166
BLEU169
BLYS170

Functional Information from PROSITE/UniProt
site_idPS00211
Number of Residues15
DetailsABC_TRANSPORTER_1 ABC transporters family signature. LSGGERALISISLAM
ChainResidueDetails
ALEU767-MET781

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000250|UniProtKB:Q8U1N9, ECO:0000255|HAMAP-Rule:MF_02044
ChainResidueDetails
BGLN94

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:21937514, ECO:0000269|PubMed:24316220, ECO:0007744|PDB:3THN, ECO:0007744|PDB:3THO, ECO:0007744|PDB:4NZV, ECO:0007744|PDB:4O24, ECO:0007744|PDB:4O43, ECO:0007744|PDB:4O4K, ECO:0007744|PDB:4O5G
ChainResidueDetails
BASP14
BHIS16
BASP58
BHIS216

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:21937514, ECO:0000269|PubMed:24316220, ECO:0007744|PDB:3THN, ECO:0007744|PDB:3THO, ECO:0007744|PDB:4NZV, ECO:0007744|PDB:4O24, ECO:0007744|PDB:4O4K
ChainResidueDetails
BHIS180
ALYS36
ASER38
AARG53
AARG63

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:21937514, ECO:0000269|PubMed:24316220, ECO:0007744|PDB:4NZV
ChainResidueDetails
BHIS218
AGLN142

site_idSWS_FT_FI5
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305|PubMed:21458667, ECO:0000305|PubMed:25349191, ECO:0007744|PDB:3QF7, ECO:0007744|PDB:3THO, ECO:0007744|PDB:4W9M
ChainResidueDetails
AASP59

site_idSWS_FT_FI6
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305|PubMed:21458667, ECO:0000305|PubMed:21937514, ECO:0007744|PDB:3QF7, ECO:0007744|PDB:3THO
ChainResidueDetails
AVAL61

site_idSWS_FT_FI7
Number of Residues1
DetailsBINDING: BINDING => ECO:0007744|PDB:4W9M
ChainResidueDetails
AASP797

221051

PDB entries from 2024-06-12

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