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3L0K

Human orotidyl-5'-monophosphate decarboxylase in complex with 6-acetyl-UMP

Replaces:  3EX0
Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0044205biological_process'de novo' UMP biosynthetic process
B0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE 6AU A 257
ChainResidue
ASER33
AILE177
APRO193
AGLN206
ATYR208
AGLY226
AARG227
AHOH294
AHOH308
AHOH457
BASP93
AASP35
BILE94
BTHR97
ALYS57
AHIS59
AASP88
ALYS90
AASN117
AMET147
ASER148

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 258
ChainResidue
AGLY4
AALA5
AGLN24
AHOH378

site_idAC3
Number of Residues21
DetailsBINDING SITE FOR RESIDUE 6AU B 257
ChainResidue
AASP93
AILE94
ATHR97
BSER33
BASP35
BLYS57
BHIS59
BASP88
BLYS90
BASN117
BMET147
BSER148
BILE177
BPRO193
BGLN206
BTYR208
BGLY226
BARG227
BHOH270
BHOH271
BHOH287

Functional Information from PROSITE/UniProt
site_idPS00156
Number of Residues14
DetailsOMPDECASE Orotidine 5'-phosphate decarboxylase active site. IFeDrKfaDIGnTV
ChainResidueDetails
AILE85-VAL98

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: For OMPdecase activity => ECO:0000269|PubMed:18184586
ChainResidueDetails
AASP88
ALYS90
AASP93
BASP88
BLYS90
BASP93

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:18184586, ECO:0007744|PDB:2QCD
ChainResidueDetails
ASER33
AASP93
ATHR97
BSER33
BASP93
BTHR97

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:18184586, ECO:0007744|PDB:2QCD, ECO:0007744|PDB:2QCH
ChainResidueDetails
AASP35
ASER148
BASP35
BSER148
BGLN206
BGLY226
AGLN206
AGLY226

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:18184586, ECO:0007744|PDB:2QCL
ChainResidueDetails
ALYS57
ALYS90
BLYS57
BLYS90

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PDB entries from 2024-05-29

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