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2V3H

Thrombin with 3-cycle no F

Functional Information from GO Data
ChainGOidnamespacecontents
H0004252molecular_functionserine-type endopeptidase activity
H0005509molecular_functioncalcium ion binding
H0006508biological_processproteolysis
H0007596biological_processblood coagulation
L0004252molecular_functionserine-type endopeptidase activity
L0005576cellular_componentextracellular region
L0006508biological_processproteolysis
L0007596biological_processblood coagulation
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE I25 H 1246
ChainResidue
HHIS57
HGLY216
HGLY219
HGLY226
HHOH2275
HHOH2296
HHOH2325
HHOH2326
HTYR60
HLEU99
HASP189
HALA190
HGLU192
HSER195
HSER214
HTRP215

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA H 1247
ChainResidue
HARG221
HLYS224
HHOH2260
HHOH2261
HHOH2298
HHOH2306

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA H 1248
ChainResidue
HLYS169
HTHR172
HPHE204
HHOH2238
HHOH2239
HHOH2281

site_idAC4
Number of Residues14
DetailsBINDING SITE FOR CHAIN I OF HIRUDIN IIA
ChainResidue
HPHE34
HGLN38
HARG67
HARG73
HTHR74
HARG75
HARG75
HTYR76
HILE82
HHOH2117
HHOH2121
HHOH2122
HHOH2124
IHOH2001

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
ChainResidueDetails
HLEU53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DAceGDSGGPFV
ChainResidueDetails
HASP189-VAL200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Sulfotyrosine => ECO:0000250
ChainResidueDetails
ITYR9
HASP102
HSER195

site_idSWS_FT_FI2
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19139490, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19838169, ECO:0000269|PubMed:873923
ChainResidueDetails
HASN60

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HASP102
HSER195
HGLY193
HHIS57

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HASP102
HHIS57

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HSER195
HGLY193

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HSER195
HGLY196

site_idCSA5
Number of Residues3
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HASP102
HSER195
HHIS57

site_idCSA6
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
HASP102
HSER195
HHIS57
HGLY196

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PDB entries from 2024-05-01

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