Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2IHM

Polymerase mu in ternary complex with gapped 11mer DNA duplex and bound incoming nucleotide

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
B0003677molecular_functionDNA binding
B0003887molecular_functionDNA-directed DNA polymerase activity
B0005634cellular_componentnucleus
B0006281biological_processDNA repair
B0016779molecular_functionnucleotidyltransferase activity
B0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 700
ChainResidue
AASP330
AASP332
AD3T538
AHOH903

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 800
ChainResidue
AD3T638
BASP330
BASP332
BHOH902

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 900
ChainResidue
AVAL243
AVAL246
PDA5
ATHR241

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 901
ChainResidue
BTHR241
BVAL243
BVAL246
QDA5

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 902
ChainResidue
AASP330
AASP332
AASP420
AD3T538
PDT6

site_idAC6
Number of Residues22
DetailsBINDING SITE FOR RESIDUE D3T A 538
ChainResidue
AGLY319
AGLY320
AARG323
ALYS325
AGLN327
AGLY328
AHIS329
AASP330
AASP332
AGLY435
ATRP436
AGLY438
AGLN440
AGLU443
AMG700
ANA902
AHOH905
AHOH910
AHOH924
AHOH926
PDT6
TDA5

site_idAC7
Number of Residues19
DetailsBINDING SITE FOR RESIDUE D3T A 638
ChainResidue
AHOH953
AHOH983
AHOH984
BGLY319
BGLY320
BARG323
BLYS325
BGLY328
BHIS329
BASP330
BASP332
BGLY435
BTRP436
BGLY438
BGLN440
BGLU443
BMG800
QDT6
UDA5

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ATHR241
AVAL243
AASP420
BTHR241
BVAL243
BASP420

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING:
ChainResidueDetails
AASP330
AASP332
BASP330
BASP332

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP => ECO:0000250
ChainResidueDetails
AGLY435
BGLY435

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon