1XL8
Crystal structure of mouse carnitine octanoyltransferase in complex with octanoylcarnitine
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005739 | cellular_component | mitochondrion |
A | 0005777 | cellular_component | peroxisome |
A | 0006091 | biological_process | generation of precursor metabolites and energy |
A | 0006631 | biological_process | fatty acid metabolic process |
A | 0006635 | biological_process | fatty acid beta-oxidation |
A | 0008458 | molecular_function | carnitine O-octanoyltransferase activity |
A | 0009410 | biological_process | response to xenobiotic stimulus |
A | 0009437 | biological_process | carnitine metabolic process |
A | 0015908 | biological_process | fatty acid transport |
A | 0015936 | biological_process | coenzyme A metabolic process |
A | 0016746 | molecular_function | acyltransferase activity |
A | 0043231 | cellular_component | intracellular membrane-bounded organelle |
A | 0051791 | biological_process | medium-chain fatty acid metabolic process |
B | 0005739 | cellular_component | mitochondrion |
B | 0005777 | cellular_component | peroxisome |
B | 0006091 | biological_process | generation of precursor metabolites and energy |
B | 0006631 | biological_process | fatty acid metabolic process |
B | 0006635 | biological_process | fatty acid beta-oxidation |
B | 0008458 | molecular_function | carnitine O-octanoyltransferase activity |
B | 0009410 | biological_process | response to xenobiotic stimulus |
B | 0009437 | biological_process | carnitine metabolic process |
B | 0015908 | biological_process | fatty acid transport |
B | 0015936 | biological_process | coenzyme A metabolic process |
B | 0016746 | molecular_function | acyltransferase activity |
B | 0043231 | cellular_component | intracellular membrane-bounded organelle |
B | 0051791 | biological_process | medium-chain fatty acid metabolic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE 152 A 613 |
Chain | Residue |
A | TRP85 |
A | HIS327 |
A | TYR439 |
A | THR441 |
A | THR452 |
A | SER542 |
A | THR543 |
A | MSE558 |
A | HOH616 |
site_id | AC2 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE OCB B 613 |
Chain | Residue |
B | TRP85 |
B | PHE103 |
B | HIS327 |
B | ALA332 |
B | MSE335 |
B | TYR439 |
B | THR441 |
B | THR452 |
B | SER542 |
B | THR543 |
B | SER544 |
B | VAL546 |
B | GLY553 |
B | VAL555 |
B | MSE558 |
B | PHE566 |
B | HOH627 |
site_id | AC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MPD B 614 |
Chain | Residue |
B | HIS191 |
B | LYS268 |
B | GLU366 |
site_id | AC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE MPD B 615 |
Chain | Residue |
B | LYS33 |
B | LEU36 |
B | GLU52 |
B | VAL55 |
B | GLN56 |
B | GLN59 |
B | GLU366 |
B | HOH757 |
site_id | AC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MPD B 616 |
Chain | Residue |
B | ARG75 |
B | SER257 |
B | LEU258 |
site_id | AC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MPD B 617 |
Chain | Residue |
B | TRP85 |
B | GLY537 |
site_id | AC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MPD B 618 |
Chain | Residue |
B | GLU123 |
B | SER126 |
B | MSE127 |
B | PRO215 |
B | TRP353 |
B | GLU357 |
Functional Information from PROSITE/UniProt
site_id | PS00439 |
Number of Residues | 16 |
Details | ACYLTRANSF_C_1 Acyltransferases ChoActase / COT / CPT family signature 1. LPsLPVPaLeESLkkY |
Chain | Residue | Details |
A | LEU20-TYR35 |
site_id | PS00440 |
Number of Residues | 28 |
Details | ACYLTRANSF_C_2 Acyltransferases ChoActase / COT / CPT family signature 2. RWgDKsYnLIsfaNGifgcccDHapyDA |
Chain | Residue | Details |
A | ARG305-ALA332 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton acceptor => ECO:0000269|PubMed:15492013 |
Chain | Residue | Details |
A | HIS327 | |
B | HIS327 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000250 |
Chain | Residue | Details |
A | LYS406 | |
A | LYS410 | |
B | LYS406 | |
B | LYS410 |
site_id | SWS_FT_FI3 |
Number of Residues | 6 |
Details | BINDING: |
Chain | Residue | Details |
A | TYR439 | |
A | THR441 | |
A | THR452 | |
B | TYR439 | |
B | THR441 | |
B | THR452 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | MOD_RES: N-acetylmethionine => ECO:0000250|UniProtKB:Q9UKG9 |
Chain | Residue | Details |
A | MET1 | |
B | MET1 |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | MOD_RES: N6-succinyllysine => ECO:0007744|PubMed:23806337 |
Chain | Residue | Details |
A | LYS40 | |
A | LYS57 | |
B | LYS40 | |
B | LYS57 |
site_id | SWS_FT_FI6 |
Number of Residues | 2 |
Details | MOD_RES: N6-succinyllysine; alternate => ECO:0007744|PubMed:23806337 |
Chain | Residue | Details |
A | LYS406 | |
B | LYS406 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1q6x |
Chain | Residue | Details |
A | TYR90 | |
A | PRO106 | |
A | SER544 | |
A | HIS327 |
site_id | CSA2 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1q6x |
Chain | Residue | Details |
B | TYR90 | |
B | PRO106 | |
B | SER544 | |
B | HIS327 |
site_id | CSA3 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1q6x |
Chain | Residue | Details |
A | SER544 | |
A | HIS327 |
site_id | CSA4 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1q6x |
Chain | Residue | Details |
B | SER544 | |
B | HIS327 |