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1F5A

CRYSTAL STRUCTURE OF MAMMALIAN POLY(A) POLYMERASE

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0005634cellular_componentnucleus
A0016779molecular_functionnucleotidyltransferase activity
A0031123biological_processRNA 3'-end processing
A1990817molecular_functionpoly(A) RNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MN A 1001
ChainResidue
AASP113
AASP115
AASP167
A3AT1000
AMN1002
AHOH2155
A3PO4000

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MN A 1002
ChainResidue
A3AT1000
AMN1001
AMN1003
AHOH2104
A3PO4000
AASP113
AASP115

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MN A 1003
ChainResidue
A3AT1000
AMN1002
A3PO4000

site_idAC4
Number of Residues23
DetailsBINDING SITE FOR RESIDUE 3AT A 1000
ChainResidue
APHE100
AGLY101
ASER102
ATHR109
AASP115
AVAL154
ALYS158
AASP167
ALYS228
ATYR237
AGLY246
AVAL247
AMN1001
AMN1002
AMN1003
AHOH2010
AHOH2045
AHOH2104
AHOH2127
AHOH2129
AHOH2155
AHOH2167
A3PO4000

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE 3PO A 4000
ChainResidue
AALA112
AASP113
A3AT1000
AMN1001
AMN1002
AMN1003
AHOH2155

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING:
ChainResidueDetails
APHE100
ATHR109
AASP113
AASP115
AASP167
ALYS228
ATYR237
AGLY246

site_idSWS_FT_FI2
Number of Residues4
DetailsSITE: Interaction with RNA => ECO:0000250
ChainResidueDetails
APHE153
ALYS158
AASN328
AARG399

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P51003
ChainResidueDetails
ASER10
ASER24

site_idSWS_FT_FI4
Number of Residues5
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) => ECO:0000305
ChainResidueDetails
ALYS444
ALYS445
ALYS506
ALYS507

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PDB entries from 2024-04-24

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