8OO5
Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 13
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-10-12 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 81.577, 81.577, 234.132 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 52.430 - 2.250 |
R-factor | 0.1826 |
Rwork | 0.181 |
R-free | 0.22018 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.017 |
RMSD bond angle | 2.079 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.430 | 2.320 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.271 | 2.748 |
Rmeas | 0.278 | 2.810 |
Rpim | 0.059 | 0.583 |
Total number of observations | 47398 | |
Number of reflections | 22902 | 2066 |
<I/σ(I)> | 11.4 | 2.2 |
Completeness [%] | 100.0 | |
Redundancy | 21.8 | 22.9 |
CC(1/2) | 0.996 | 0.771 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 1.91M LiSO4, 0.1M Tris pH 7.5 |