8HGE
Crystal structure of the CYP153A mutant V456A from Marinobacter aquaeolei in complex with 12-hydroxydodecanoic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-10-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 44.522, 103.568, 52.738 |
Unit cell angles | 90.00, 112.19, 90.00 |
Refinement procedure
Resolution | 31.540 - 1.530 |
R-factor | 0.1608 |
Rwork | 0.160 |
R-free | 0.18710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5fyg |
RMSD bond length | 0.012 |
RMSD bond angle | 1.222 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX (1.18.2) |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.560 |
High resolution limit [Å] | 1.530 | 1.530 |
Rmerge | 0.048 | 0.132 |
Rmeas | 0.057 | 0.165 |
Rpim | 0.031 | 0.097 |
Number of reflections | 63827 | 2949 |
<I/σ(I)> | 19.9 | |
Completeness [%] | 95.6 | 87.9 |
Redundancy | 3.3 | 2.7 |
CC(1/2) | 0.998 | 0.964 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 0.2 M Li2SO4, 0.1 M HEPES 7.0, 26% PEG3350 |