7U4Z
The ubiquitin-associated domain of human thirty-eight negative kinase-1 flexibly fused to the 1TEL crystallization chaperone via a 2-glycine linker and crystallized at very low protein concentration
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 65 |
Unit cell lengths | 67.375, 67.375, 58.683 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 33.690 - 2.030 |
R-factor | 0.2034 |
Rwork | 0.202 |
R-free | 0.23180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qar 7tcy |
RMSD bond length | 0.005 |
RMSD bond angle | 0.622 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.690 | 2.103 |
High resolution limit [Å] | 2.030 | 2.030 |
Rmerge | 0.220 | 1.842 |
Rmeas | 0.226 | 1.890 |
Rpim | 0.051 | 0.419 |
Number of reflections | 8862 | 976 |
<I/σ(I)> | 11.07 | 2.39 |
Completeness [%] | 89.4 | 100 |
Redundancy | 19.5 | 20.2 |
CC(1/2) | 0.998 | 0.839 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 1.2 uL of 0.5 mg/mL protein combined with 1.2 uL of 100 mM Bis-Tris, pH 6.00, 630-750 mM Mg-Formate. |