7R3H
PROSS optimitzed variant of RhlR (75 mutations) in complex with native autoinducer C4-HSL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-13 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.952, 91.560, 117.329 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 70.370 - 3.490 |
R-factor | 0.225 |
Rwork | 0.223 |
R-free | 0.26970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | predicted structure of RhlR with phyre2 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.20-4459) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 72.180 | 72.180 | 3.680 |
High resolution limit [Å] | 3.490 | 11.040 | 3.490 |
Rmerge | 0.350 | 0.060 | 1.459 |
Rmeas | 0.365 | 0.063 | 1.516 |
Rpim | 0.101 | 0.018 | 0.409 |
Total number of observations | 161488 | 5258 | 24322 |
Number of reflections | 12584 | 462 | 1804 |
<I/σ(I)> | 8 | 26.7 | 2.5 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 12.8 | 11.4 | 13.5 |
CC(1/2) | 0.995 | 0.998 | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M NaSCN, 20 % (w/v) PEG 3350 3.5 mg/ml protein Cryoprotectant: 10 % (v/v) (2R,3R) -(-)-2,3-Butanediol |