7MYJ
Structure of full length human AMPK (a2b1g1) in complex with a small molecule activator MSG011
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-04-02 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.71073 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 75.844, 134.199, 141.821 |
Unit cell angles | 90.00, 92.55, 90.00 |
Refinement procedure
Resolution | 48.720 - 2.950 |
R-factor | 0.215 |
Rwork | 0.213 |
R-free | 0.24300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6b1u |
RMSD bond length | 0.008 |
RMSD bond angle | 0.980 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.720 | 3.055 |
High resolution limit [Å] | 2.950 | 2.950 |
Rmerge | 0.053 | 0.370 |
Rmeas | 0.075 | 0.523 |
Rpim | 0.053 | 0.369 |
Number of reflections | 59194 | 5846 |
<I/σ(I)> | 10.7 | 2.2 |
Completeness [%] | 98.9 | 97.82 |
Redundancy | 2.4 | 2.2 |
CC(1/2) | 0.995 | 0.735 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 277.15 | 8-10% PEG3350, 1% glucose, 0.1 M magnesium chloride, 0.1 M imidazole, 0.0005-0.003% CAPB |