7MK5
Crystal structure of Escherichia coli ClpP covalently inhibited by clipibicyclene
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-02-05 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97895 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 94.331, 190.230, 169.884 |
Unit cell angles | 90.00, 93.61, 90.00 |
Refinement procedure
Resolution | 45.410 - 2.950 |
R-factor | 0.2124 |
Rwork | 0.211 |
R-free | 0.24790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | ITYF |
RMSD bond length | 0.010 |
RMSD bond angle | 1.267 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.410 | 3.055 |
High resolution limit [Å] | 2.950 | 2.950 |
Rmerge | 0.175 | 1.250 |
Rpim | 0.102 | 0.720 |
Number of reflections | 125212 | 12429 |
<I/σ(I)> | 6.9 | 1.2 |
Completeness [%] | 99.7 | 99.7 |
Redundancy | 3.9 | |
CC(1/2) | 0.988 | 0.423 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | 0.1 M sodium acetate, 30% MPD |