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6UPA

Crystal Structure of GTPase Domain of Human Septin 2/Septin 6 Heterocomplex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-15
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.96861
Spacegroup nameP 41 21 2
Unit cell lengths82.730, 82.730, 170.350
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.209 - 2.510
R-factor0.226
Rwork0.224
R-free0.26550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2qnr 4kva
Data reduction softwarexia2
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]37.21037.2102.580
High resolution limit [Å]2.51011.2302.510
Rmerge0.1520.0442.235
Rmeas0.1590.0462.324
Rpim0.0440.0140.635
Total number of observations269502290320143
Number of reflections210212991516
<I/σ(I)>11.637.61.2
Completeness [%]99.997.899.9
Redundancy12.89.713.3
CC(1/2)0.9990.9990.564
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5291100mM bicine/Trizma base pH 8.5, 12.5% PEG 1000, 12.5% PEG 3350, 12.5% MPD and 20mM of each d-glucose, d-mannose,d-galactose, l-fucose, d-xylose, N-acetyld-glucosamine

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PDB entries from 2024-05-15

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