6T36
Crystal structure of the PTPN3 PDZ domain bound to the HBV core protein C-terminal peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-13 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97857 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 75.578, 75.578, 46.594 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.350 - 1.860 |
R-factor | 0.1975 |
Rwork | 0.195 |
R-free | 0.23920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6hks |
RMSD bond length | 0.007 |
RMSD bond angle | 0.814 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.590 | 1.970 |
High resolution limit [Å] | 1.860 | 1.860 |
Rmeas | 0.575 | |
Number of reflections | 13198 | 2065 |
<I/σ(I)> | 7.67 | |
Completeness [%] | 99.4 | 96.98 |
Redundancy | 5.1 | |
CC(1/2) | 0.999 | 0.977 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277.15 | 20% w/v PEG 3350, 0.2 M NaBr |