6NEW
Apo structure of the activated truncation of Vav1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-02-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9774 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.925, 67.693, 178.560 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.700 - 2.500 |
R-factor | 0.202 |
Rwork | 0.199 |
R-free | 0.25700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | in-house Vav1-Rac1 complex |
RMSD bond length | 0.010 |
RMSD bond angle | 1.130 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.29) |
Phasing software | PHASER (2.7.17) |
Refinement software | BUSTER |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.700 | 2.600 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.116 | 0.740 |
Rmeas | 0.120 | 0.767 |
Rpim | 0.032 | 0.199 |
Total number of observations | 228443 | |
Number of reflections | 16248 | 1770 |
<I/σ(I)> | 22 | |
Completeness [%] | 99.9 | 99.7 |
Redundancy | 14.1 | 14.7 |
CC(1/2) | 0.999 | 0.916 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.3 | 294 | 16-22% (v/v) Ethylene Glycol, 0.1M TRIS pH 7.3, and 15% (w/v) Polyethylene Glycol 8000 |