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6NEL

4-(2-(4-fluorophenyl)-5-hydroxy-6-oxo-1,6-dihydropyridin-3-yl)benzoic acid bound to influenza 2009 pH1N1 endonuclease

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2015-03-21
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.03
Spacegroup nameC 2 2 21
Unit cell lengths88.250, 101.270, 66.570
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.635 - 2.000
R-factor0.2057
Rwork0.205
R-free0.22590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4m5r
RMSD bond length0.011
RMSD bond angle0.540
Data scaling softwareAimless (3.3.22)
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]66.53066.5301.780
High resolution limit [Å]1.6805.3301.680
Rmerge0.1330.0872.778
Rmeas0.1560.0983.267
Rpim0.0640.0411.325
Total number of observations187362
Number of reflections3278011574647
<I/σ(I)>5.6
Completeness [%]96.598.395.2
Redundancy5.75.55.8
CC(1/2)0.9920.9890.044
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.7293Crystals were formed by mixing in a 1:1 ratio the purified endonuclease protein (5 mg/ml) with crystallization buffer containing 200 mM MES pH 6.7, 27% PEG8000, 200 mM ammonium sulfate, 1 mM manganese chloride, 10 mM magnesium acetate, 10 mM taurine, and 50 mM sodium fluoride. Crystals matured to full size in one to two weeks at 20 degrees C.

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