6N2W
The structure of Stable-5-Lipoxygenase bound to NDGA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-11 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.152, 204.358, 76.712 |
Unit cell angles | 90.00, 99.91, 90.00 |
Refinement procedure
Resolution | 75.570 - 2.710 |
R-factor | 0.2155 |
Rwork | 0.213 |
R-free | 0.26260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3o8y monomer |
RMSD bond length | 0.007 |
RMSD bond angle | 0.825 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 102.180 | 2.809 |
High resolution limit [Å] | 2.709 | 2.713 |
Rmerge | 0.270 | 1.454 |
Rpim | 0.160 | 0.877 |
Number of reflections | 148992 | 12579 |
<I/σ(I)> | 6.78 | 0.9 |
Completeness [%] | 98.2 | 89.09 |
Redundancy | 3.7 | 3.5 |
CC(1/2) | 0.971 | 0.325 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 8-10% Tacsimate |