6KMS
Crystal structure of human N6amt1-Trm112 in complex with SAM (space group I422)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-07-14 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9792 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 195.354, 195.354, 246.551 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.386 - 3.200 |
R-factor | 0.2333 |
Rwork | 0.232 |
R-free | 0.26930 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.374 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.310 |
High resolution limit [Å] | 3.200 | 6.890 | 3.200 |
Rmerge | 0.234 | 0.073 | 2.203 |
Rmeas | 0.239 | 0.074 | 2.244 |
Rpim | 0.044 | 0.014 | 0.420 |
Number of reflections | 39672 | 4180 | 3900 |
<I/σ(I)> | 26.67 | ||
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 28.8 | 28.3 | 28.1 |
CC(1/2) | 0.999 | 0.768 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 289 | 1.6M (NH4)2SO4, 0.1M MES, pH 6.5, 10% 1,4-Dioxane |