6IDO
Crystal structure of Klebsiella pneumoniae sigma4 of sigmaS fusing with the RNA polymerase beta-flap-tip-helix in complex with -35 element DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-10-03 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 0.99984 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 154.540, 154.540, 144.960 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.616 - 3.748 |
R-factor | 0.2256 |
Rwork | 0.223 |
R-free | 0.25250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ipl |
RMSD bond length | 0.004 |
RMSD bond angle | 0.676 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.616 | 3.880 |
High resolution limit [Å] | 3.748 | 3.748 |
Rmerge | 0.046 | 0.518 |
Number of reflections | 13130 | 871 |
<I/σ(I)> | 42.909 | 4.333 |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.2 | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 298 | 0.2 M Ammonium sulfate, 0.1 M Sodium acetate trihydrate (pH 4.6), and 25% w/v Polyethylene glycol 4,000. |