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6IDO

Crystal structure of Klebsiella pneumoniae sigma4 of sigmaS fusing with the RNA polymerase beta-flap-tip-helix in complex with -35 element DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, B)
RNA polymerase sigma factor RpoS,RNA polymerase beta-flap-tip-helixpolymer11512946.72UniProt (Q9F8R5)
Pfam (PF04545)
UniProt (by SIFTS) (P13445)
UniProt (by SIFTS) (A6TGP0)
Escherichia coliSigma S,Sigma S
2B, E
(C, E)
DNA (5'-D(P*GP*AP*TP*TP*TP*GP*TP*CP*AP*AP*GP*TP*GP*GP*C)-3')polymer154640.02Klebsiella pneumoniae
3C, F
(D, F)
DNA (5'-D(P*CP*CP*AP*CP*TP*TP*GP*AP*CP*AP*AP*AP*TP*CP*G)-3')polymer164867.22Klebsiella pneumoniae
Sequence modifications
A, B: 16 - 90 (UniProt: Q9F8R5)
PDBExternal DatabaseDetails
Gly 1-expression tag
Ala 2-expression tag
Met 3-expression tag
Gly 4-expression tag
Gly 5-expression tag
Pro 6-expression tag
Glu 7-expression tag
Asp 8-expression tag
Thr 9-expression tag
Thr 10-expression tag
Gln 11-expression tag
Asp 12-expression tag
Asp 13-expression tag
Asp 14-expression tag
Met 15-expression tag
Gly 79Thr 319engineered mutation
Gly 91-linker
Ser 92-linker
Gly 93-linker
Ser 94-linker
A, B: 95 - 115 (PDB: 6IDO)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight44907.7
All*Total formula weight44907.7
*Water molecules are not included.

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PDB entries from 2025-07-02

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