5TUN
Crystal structure of uninhibited human Cathepsin K at 1.62 Angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-01-15 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 32.080, 66.640, 93.370 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.121 - 1.620 |
R-factor | 0.1541 |
Rwork | 0.152 |
R-free | 0.19450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1atk |
RMSD bond length | 0.006 |
RMSD bond angle | 0.925 |
Data reduction software | iMOSFLM (7.2.1) |
Data scaling software | SCALA (3.3.6) |
Phasing software | PHASER (1.3.1) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.240 | 1.710 |
High resolution limit [Å] | 1.620 | 1.620 |
Rmerge | 0.196 | 0.582 |
Number of reflections | 26167 | |
<I/σ(I)> | 6.2 | 2.5 |
Completeness [%] | 99.7 | 99.5 |
Redundancy | 4.6 | 4.5 |
CC(1/2) | 0.969 | 0.720 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 294.15 | 20% polyethylene glycol (PEG) 8000, 0.1 M phosphate/citrate pH 4.2 and 0.2 M sodium chloride |