5Q3U
PanDDA analysis group deposition -- Crystal Structure of DCLRE1A after initial refinement with no ligand modelled (structure 58)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Detector technology | PIXEL |
| Collection date | 2016-09-29 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 51.956, 57.033, 115.081 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 28.770 - 1.490 |
| R-factor | 0.1803 |
| Rwork | 0.179 |
| R-free | 0.20760 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5aho |
| RMSD bond length | 0.025 |
| RMSD bond angle | 2.188 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.27) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 28.770 | 28.770 | 1.530 |
| High resolution limit [Å] | 1.490 | 6.660 | 1.490 |
| Rmerge | 0.043 | 0.021 | 0.704 |
| Rmeas | 0.047 | 0.023 | 0.768 |
| Rpim | 0.018 | 0.009 | 0.304 |
| Total number of observations | 370228 | 4398 | 25531 |
| Number of reflections | 56650 | ||
| <I/σ(I)> | 21.9 | 72.1 | 2.4 |
| Completeness [%] | 99.9 | 98.7 | 99.3 |
| Redundancy | 6.5 | 6 | 6.2 |
| CC(1/2) | 1.000 | 0.999 | 0.822 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 1000, 0.1M MIB buffer |
