5JNT
Crystal structure of human low molecular weight protein tyrosine phosphatase (LMPTP) type A complexed with MES
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 12.3.1 |
Synchrotron site | ALS |
Beamline | 12.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-08-28 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0781 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.905, 55.018, 96.423 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.900 - 1.450 |
R-factor | 0.1362 |
Rwork | 0.135 |
R-free | 0.16580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jnr |
RMSD bond length | 0.036 |
RMSD bond angle | 3.023 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.1) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.900 | 33.900 | 1.380 |
High resolution limit [Å] | 1.360 | 7.440 | 1.360 |
Rmerge | 0.039 | 0.023 | 0.227 |
Number of reflections | 38952 | ||
<I/σ(I)> | 25 | ||
Completeness [%] | 97.8 | 87.2 | 72.7 |
Redundancy | 5.9 | 5.5 | 1.6 |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.5 | 293 | 20% PEG 3350, 200 mM NaCl, 40 mM MES |