5H2R
Crystal structure of T brucei phosphodiesterase B2 bound to compound 15b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-05-12 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 97.756, 97.756, 120.783 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.160 - 1.800 |
R-factor | 0.178 |
Rwork | 0.176 |
R-free | 0.22380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5h2q |
RMSD bond length | 0.010 |
RMSD bond angle | 0.980 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | BUSTER (2.11.4) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.160 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Number of reflections | 61560 | |
<I/σ(I)> | 11.8 | |
Completeness [%] | 98.4 | |
Redundancy | 10.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 15-20% PEG 3350, 0.1 M MES, pH 5.5, 0.2 M MgCl2 |