Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4UOY

Crystal structure of YgjG in complex with Pyridoxal-5'-phosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Temperature [K]100
Detector technologyCCD
Collection date2013-11-03
DetectorADSC QUANTUM 315
Spacegroup nameP 21 21 21
Unit cell lengths120.945, 129.319, 131.102
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.746 - 2.305
R-factor0.1818
Rwork0.181
R-free0.23340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1vef
RMSD bond length0.009
RMSD bond angle1.136
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.340
High resolution limit [Å]2.3002.300
Rmerge0.1000.360
Number of reflections91029
<I/σ(I)>13.43
Completeness [%]98.396.9
Redundancy6.14.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
17.50.1 M HEPES PH 7.5 15% PEG 3350 0.2 M SODIUM FORMATE 0.1 MM N-DODECYL-N,N-DIMETHYLGLYCINE

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon