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4R5P

Crystal structure of HIV-1 reverse transcriptase (RT) with DNA and a nucleoside triphosphate mimic alpha-carboxy nucleoside phosphonate inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F1
Synchrotron siteCHESS
BeamlineF1
Temperature [K]100
Detector technologyCCD
Collection date2013-10-13
DetectorADSC QUANTUM 270
Wavelength(s)0.918
Spacegroup nameP 1 21 1
Unit cell lengths89.905, 133.529, 139.218
Unit cell angles90.00, 97.81, 90.00
Refinement procedure
Resolution44.536 - 2.894
R-factor0.1965
Rwork0.195
R-free0.25060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3v4i
RMSD bond length0.012
RMSD bond angle1.514
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX ((phenix.refine: 1.8.4_1496))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.950
High resolution limit [Å]2.8942.894
Rmerge0.1070.634
Number of reflections72131
<I/σ(I)>8.91.85
Completeness [%]99.699.2
Redundancy43.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.227710% PEG8000, 100 mM ammonium sulfate, 5% w/v sucrose, 5% w/v glycerol, 20 mM magnesium chloride, 50 mM Bis-Tris propane, pH 7.2, VAPOR DIFFUSION, SITTING DROP, temperature 277K

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