4QYA
Crystal structure of human transthyretin variant V30M in complex with luteolin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-17 |
Detector | Bruker Platinum 135 |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 42.894, 85.854, 63.685 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.806 - 1.700 |
R-factor | 0.1643 |
Rwork | 0.163 |
R-free | 0.19750 |
Structure solution method | MOLREP |
RMSD bond length | 0.007 |
RMSD bond angle | 1.102 |
Data reduction software | SAINT |
Data scaling software | SADABS |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.000 | 1.760 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.045 | 0.310 |
Number of reflections | 26524 | |
<I/σ(I)> | 43.3 | 6.1 |
Completeness [%] | 99.5 | 95.9 |
Redundancy | 8.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | V30M-TTR CONCENTRATION WAS 5 MG/ML IN 10 MM SODIUMPHOSPHATE, PH 7.6, 100 MM POTASSIUMCLORIDE. V30M-TTR WAS CO-CRYSTALLIZED AT ROOM TEMPERATURE WITH 5 MOLAR EXCESS OF LUTEOLIN IN 3.5% V/V GLYCEROL AND 1.3-1.6 M SODIUM CITRATE AT PH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |