Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4DDJ

Crystal structure of saposin A in complex with lauryldimethylamine-N-oxide (LDAO)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2009-07-25
DetectorADSC QUANTUM 315
Wavelength(s)1.009
Spacegroup nameP 61 2 2
Unit cell lengths39.794, 39.794, 247.284
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution10.000 - 1.900
R-factor0.232
Rwork0.230
R-free0.28000
Structure solution methodSAD
RMSD bond length0.017
RMSD bond angle1.900
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareSHELXS
Refinement softwareREFMAC (5.5.0102)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.5001.930
High resolution limit [Å]1.9001.900
Rmerge0.0510.443
Number of reflections9934
<I/σ(I)>44.93.2
Completeness [%]98.798.1
Redundancy9.15.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.53001.6 M trisodium citrate, pH 6.5, VAPOR DIFFUSION, temperature 300K
1VAPOR DIFFUSION6.53001.6 M trisodium citrate, pH 6.5, VAPOR DIFFUSION, temperature 300K

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon