4B3O
Structures of HIV-1 RT and RNA-DNA Complex Reveal a Unique RT Conformation and Substrate Interface
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-07-10 |
Detector | MARRESEARCH MX-300 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 164.598, 164.598, 129.030 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.733 - 3.300 |
R-factor | 0.2758 |
Rwork | 0.275 |
R-free | 0.29540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rtd |
RMSD bond length | 0.008 |
RMSD bond angle | 0.875 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.390 |
High resolution limit [Å] | 3.300 | 3.300 |
Number of reflections | 30196 | |
<I/σ(I)> | 17.5 | 2.3 |
Completeness [%] | 98.2 | 99.9 |
Redundancy | 4.2 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.2 | 277 | RT COMPLEX WAS MIXED WITH RESERVOIR SOLUTION CONTAINING 0.1M SODIUM CITRATE (PH5.2), 0.1M CACL2, 7.5% PEG400 (V/V). VAPOR DIFFUSION 4C. |