3W5G
Crystal structure of tomato beta-galactosidase 4 in complex with galactose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-11 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 93.930, 106.382, 162.379 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.060 - 3.000 |
R-factor | 0.20274 |
Rwork | 0.200 |
R-free | 0.25908 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3w5f |
RMSD bond length | 0.006 |
RMSD bond angle | 0.975 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.110 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.097 | 0.363 |
Number of reflections | 32837 | |
<I/σ(I)> | 22.2 | 3.5 |
Completeness [%] | 99.2 | 98.4 |
Redundancy | 6.3 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.1M HEPES, 20% (w/v) PEG 10000, 0.1M D-galactose, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K |