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3VM8

Crystal structure of the human APOBEC3C having HIV-1 Vif-binding interface

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2011-05-27
DetectorRIGAKU RAXIS VII
Wavelength(s)1.5418
Spacegroup nameP 61
Unit cell lengths104.419, 104.419, 74.502
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution90.430 - 3.000
R-factor0.2315
Rwork0.228
R-free0.30230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ir2
RMSD bond length0.006
RMSD bond angle0.992
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]1000.0001000.0003.050
High resolution limit [Å]3.0008.1403.000
Rmerge0.1080.0500.522
Number of reflections9105
<I/σ(I)>13.9
Completeness [%]97.096.6100
Redundancy10.210.110.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9293Bicine, PEG 6000, L-Arginine HCl, pH 9.0, vapor diffusion, hanging drop, temperature 293K

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