Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3R5C

Pseudomonas aeruginosa DapD (PA3666) in complex with CoA and succinate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-1
Synchrotron siteESRF
BeamlineID14-1
Temperature [K]100
Detector technologyCCD
Collection date2009-04-05
DetectorADSC QUANTUM 4r
Wavelength(s)0.9334
Spacegroup nameP 41 21 2
Unit cell lengths123.282, 123.282, 198.763
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution53.130 - 2.400
R-factor0.22671
Rwork0.225
R-free0.26748
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)polyAla model of 2RIJ.pdb
RMSD bond length0.012
RMSD bond angle1.425
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASES
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]66.0002.530
High resolution limit [Å]2.4002.400
Rmerge0.1130.654
Number of reflections60616
<I/σ(I)>17.12.6
Completeness [%]100.0100
Redundancy6.66.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.229319-20% of PEG3350, 0.3-0.4M succinate, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon