1QHD
CRYSTAL STRUCTURE OF VP6, THE MAJOR CAPSID PROTEIN OF GROUP A ROTAVIRUS
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
| Synchrotron site | EMBL/DESY, HAMBURG |
| Beamline | X11 |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 1998-08-15 |
| Detector | MARRESEARCH |
| Spacegroup name | P 41 3 2 |
| Unit cell lengths | 157.780, 157.780, 157.780 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 42.000 - 1.950 |
| Rwork | 0.188 |
| R-free | 0.21600 * |
| Structure solution method | MIRAS |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.770 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | SHARP |
| Refinement software | X-PLOR (3.851) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 42.000 | 1.980 |
| High resolution limit [Å] | 1.950 | 1.950 |
| Rmerge | 0.072 * | 0.252 * |
| Number of reflections | 48534 | |
| <I/σ(I)> | 15.6 | 5.1 |
| Completeness [%] | 98.3 | 97.3 |
| Redundancy | 7.1 | 3.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | unknown * | 7.5 | Petitpas, I., (1998) J.Virol., 72, 7615. * | |
| 1 | unknown * | 7.5 | Petitpas, I., (1998) J.Virol., 72, 7615. * | |
| 1 | unknown * | 7.5 | Petitpas, I., (1998) J.Virol., 72, 7615. * |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | 1 | protein | 10-20 (mg/ml) | |
| 2 | 1 | 1 | 100 (mM) | ||
| 3 | 1 | 1 | mPEG550 | 14-20 (%) | |
| 4 | 1 | 1 | 200 (mM) |
