[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 44 items for (author: prazak & v)

EMDB-18482:
Herpes simplex virus 1 capsid (WT) vertices in perinuclear NEC-coated vesicles determined in situ

EMDB-18484:
Herpes simplex virus 1 nuclear egress complex (WT) determined in situ from perinuclear vesicles

EMDB-17974:
Pseudorabies virus cytosolic C-capsid (US3 KO) vertices determined in situ

EMDB-17975:
Pseudorabies virus primary enveloped (perinuclear) C-capsid (US3 KO) vertices determined in situ

EMDB-17976:
Pseudorabies nuclear C-capsids (US3 KO) vertices determined in situ

EMDB-18473:
Subtomogram average of pseudorabies virus nuclear egress complex helical form (UL31/34) determined in situ

EMDB-18474:
Subtomogram average of pseudorabies virus nuclear egress complex (UL31/34) determined in situ

EMDB-18479:
Pseudorabies virus cytosolic C-capsid (WT) vertices determined in situ

EMDB-18480:
Pseudorabies virus nuclear C-capsid (WT) vertices determined in situ

EMDB-18481:
Herpes simplex virus 1 cytosolic C-capsid (WT) vertices determined in situ

EMDB-18483:
Herpes simplex virus 1 nuclear C-capsid (WT) vertices determined in situ

EMDB-17704:
Subtomogram average of Vaccinia A10 trimer with open center from in vitro cores

EMDB-17708:
Subtomogram average of Vaccinia A10 trimer with tight center from in vitro cores

EMDB-17753:
Subtomogram average of Vaccinia A10 trimer from in situ cores

EMDB-15532:
Plasmodium falciparum sporozoite subpellicular microtubule with interrupted luminal helix determined in situ

EMDB-15534:
Plasmodium falciparum gametocyte subpellicular microtubule with 13 protofilaments determined in situ

EMDB-15535:
Plasmodium falciparum gametocyte subpellicular microtubule with 14 protofilaments determined in situ

EMDB-15536:
Plasmodium falciparum gametocyte subpellicular microtubule with 15 protofilaments determined in situ

EMDB-15537:
Plasmodium falciparum gametocyte subpellicular microtubule with 16 protofilaments determined in situ

EMDB-15538:
Plasmodium falciparum gametocyte subpellicular microtubule with 17 protofilaments determined in situ

EMDB-15539:
Plasmodium falciparum gametocyte subpellicular microtubule with 18 protofilaments determined in situ

EMDB-15627:
Tomogram of the Mimivirus genomic fiber

EMDB-15628:
Tomogram of the Mimivirus genomic fiber

EMDB-15629:
Tomogram of the Mimivirus genomic fiber

EMDB-15630:
Tomogram of the Mimivirus genomic fiber

EMDB-13641:
Structure of the Mimivirus genomic fibre asymmetric unit

EMDB-14353:
Structure of the Mimivirus genomic fibre in its compact 6-start helix form

EMDB-14354:
Structure of the Mimivirus genomic fibre in its compact 5-start helix form

EMDB-14355:
Structure of the Mimivirus genomic fibre in its relaxed 5-start helix form

PDB-7ptv:
Structure of the Mimivirus genomic fibre asymmetric unit

PDB-7yx3:
Structure of the Mimivirus genomic fibre in its compact 6-start helix form

PDB-7yx4:
Structure of the Mimivirus genomic fibre in its compact 5-start helix form

PDB-7yx5:
Structure of the Mimivirus genomic fibre in its relaxed 5-start helix form

EMDB-12188:
Structure of DNA origami signpost from cryo-ET and subvolume averaging

PDB-7bho:
DNA origami signpost designed model

EMDB-11123:
Pre-fusion conformation of glycoprotein B of Herpes simplex virus 1

PDB-6z9m:
Pseudoatomic model of the pre-fusion conformation of glycoprotein B of Herpes simplex virus 1

EMDB-10134:
CryoEM structure of murine perforin-2 ectodomain in a pre-pore form

EMDB-10135:
CryoEM structure of murine perforin-2 ectodomain in a pore form

EMDB-4995:
Subtomogram average of a part of the rabies lyssavirus ribonucleoprotein

EMDB-4471:
Cryo-SOFI enabling low-dose super-resolution correlative light and electron cryo-microscopy

EMDB-4472:
Cryo-SOFI enabling low-dose super-resolution correlative light and electron cryo-microscopy

EMDB-4473:
Cryo-SOFI enabling low-dose super-resolution correlative light and electron cryo-microscopy

EMDB-3035:
The structure of YnaI implies structural and mechanistic conservation in the MscS-family of mechanosensitive channels

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more