[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 59 items for (author: cherepanov & p)

EMDB-17789:
Structure of tissue-specific lipid scramblase ATG9B homotrimer, refined with C3 symmetry applied

EMDB-17790:
Structure of tissue-specific lipid scramblase ATG9B homotrimer, refined without imposing symmetry

PDB-8poe:
Structure of tissue-specific lipid scramblase ATG9B homotrimer, refined with C3 symmetry applied

EMDB-17169:
Cryo-EM structure of the SARS-CoV-2 Spike bound to TMEM106B

EMDB-17170:
Local refinement of the SARS-CoV-2 Spike RBD bound to TMEM106B

EMDB-15604:
ATG9A and ATG2A form a heteromeric complex essential for autophagosome formation

EMDB-15605:
Low resolution 3D reconstruction of ATG2A from cryo-EM

EMDB-26737:
Mouse mammary tumor virus strand transfer complex intasome

EMDB-26744:
Higher-order assembly of multiple MMTV strand transfer complex intasomes

PDB-7usf:
Mouse mammary tumor virus strand transfer complex intasome

PDB-7ut1:
Higher-order assembly of multiple MMTV strand transfer complex intasomes

EMDB-14591:
CryoEM structure of SARS-CoV-2 spike monomer in complex with neutralising antibody P008_60

PDB-7zbu:
CryoEM structure of SARS-CoV-2 spike monomer in complex with neutralising antibody P008_60

EMDB-26322:
MVV cleaved synaptic complex (CSC) intasome at 3.4 A resolution

PDB-7u32:
MVV cleaved synaptic complex (CSC) intasome at 3.4 A resolution

EMDB-14860:
Cryo-EM structure of the MVV CSC intasome at 4.5A resolution

PDB-7zpp:
Cryo-EM structure of the MVV CSC intasome at 4.5A resolution

EMDB-14453:
MVV strand transfer complex (STC) intasome in complex with LEDGF/p75 at 3.5 A resolution

PDB-7z1z:
MVV strand transfer complex (STC) intasome in complex with LEDGF/p75 at 3.5 A resolution

PDB-7pel:
CryoEM structure of simian T-cell lymphotropic virus intasome in complex with PP2A regulatory subunit B56 gamma

EMDB-13075:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor XZ450

EMDB-13076:
STLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir

EMDB-13077:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor bictegravir

PDB-7ouf:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor XZ450

PDB-7oug:
STLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir

PDB-7ouh:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor bictegravir

EMDB-12817:
Chaetomium thermophilum Chl1 Helicase

EMDB-12585:
Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (closed conformation)

EMDB-12586:
Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (one RBD erect)

EMDB-12587:
Trimeric SARS-CoV-2 spike ectodomain bound to P008_056 Fab

PDB-7nt9:
Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (closed conformation)

PDB-7nta:
Trimeric SARS-CoV-2 spike ectodomain in complex with biliverdin (one RBD erect)

PDB-7ntc:
Trimeric SARS-CoV-2 spike ectodomain bound to P008_056 Fab

EMDB-10041:
SIVrcm intasome

EMDB-10042:
SIVrcm intasome in complex with bictegravir

EMDB-10043:
SIVrcm intasome in complex with dolutegravir

EMDB-10044:
SIVrcm intasome (Q148H/G140S) in complex with bictegravir

PDB-6rwl:
SIVrcm intasome

PDB-6rwm:
SIVrcm intasome in complex with bictegravir

PDB-6rwn:
SIVrcm intasome in complex with dolutegravir

PDB-6rwo:
SIVrcm intasome (Q148H/G140S) in complex with bictegravir

EMDB-10277:
Cryo-EM structure of human SERINC5 in LMNG micelles, bound to Fab.

EMDB-10279:
CryoEM structure of SERINC from Drosophila melanogaster

PDB-6sp2:
CryoEM structure of SERINC from Drosophila melanogaster

EMDB-4692:
Human-D02 Nucleosome Core Particle with biotin-streptavidin label

EMDB-4693:
Structure of a human nucleosome at 3.5 A resolution

EMDB-4960:
PFV intasome - nucleosome strand transfer complex

PDB-6r0c:
Human-D02 Nucleosome Core Particle with biotin-streptavidin label

PDB-6rny:
PFV intasome - nucleosome strand transfer complex

EMDB-3679:
Full-length complex of S.cerevisiae Cdt1-MCM in apo state.

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more