On 18th Aug (Sun), we exhibit a booth at the 29th Science Festa Osaka
We'll exhibit a booth at the 29th Science Festa Osaka , which is a scientific event for young people. The exhibition day of our booth is only on 8/18 (Sun). We are going to exhibit the following menus: Explanation of the basic for proteins Experience ...
257 new PDB entries have been released on 2019-08-07.
257 new PDB entries have been released on 2019-08-07. 154735 entries are now available in total. Please refer to PDB / EMDB latest information for other updates.
[wwPDB] Improve your previously released coordinates AND keep your original PDB ID with OneDep
We are pleased to announce the availability of PDB versioning, allowing depositors to update their entries while retaining the same PDB accession code. Depositors can now submit new coordinates for existing entries. Initially, this is limited to PDB ...
[wwPDB] From today: Mandatory PDBx/mmCIF format file submission for MX depositions
From today, July 1st 2019, submission of PDBx/mmCIF format files for crystallographic depositions to the PDB is mandatory. PDBx/mmCIF is now the only format accepted for deposition of PDB structures resulting from macromolecular crystallography (MX), ...
Get the chain IDs (auth_asym_ids and lable_asym_ids), entity IDs, entity names and type of chain (polymer or not) for PDB entiry 4uv7
Search Services PDBj Mine SQL Search Get the chain IDs (auth_asym_ids and lable_asym_ids), entity IDs, entity names and type of chain (polymer or not) for PDB entiry 4uv7 This search can be run from here . WITH t1 AS (SELECT DISTINCT e1.pdbid, ...
[wwPDB] Improvements to visualization of ligand validation and electron density maps in the wwPDB validation report
Our recent update to the wwPDB validation reports provides much clearer validation information for ligands. We now include 2-dimensional diagrams of ligands, highlighting geometric validation criteria and, for structures determined by crystallography, 3- ...
[wwPDB] A tribute to Prof. Michael G. Rossmann
All of us at wwPDB were deeply saddened to hear of the recent passing of Prof. Michael G. Rossmann and our condolences go out to his family and friends at this time. Michael contributed so much to the field of structural biology and was a great supporter ...
The GIRAF service will terminate
The GIRAF service will terminate on 30th April 2019. Thank you for using so long.
[wwPDB] Announcement of mandatory mmCIF submission published in Acta Cryst D
A new publication in Acta Cryst D announces the mandatory submission of PDBx/mmCIF to the PDB for crystallographic depositions. ( wwPDB news )
[wwPDB] Job Posting: Founding Director, Protein Data Bank China
A job is opening for a founding director of Protein Data Bank China (PDBc), with the primary task of establishing structure archiving activities in China. ( wwPDB news )
[wwPDB] The PDB Archive Reaches a Significant Milestone
With this week's update, the PDB archive has passed the milestone of 150,000 entries, and now contains a total of 150,145. ( wwPDB news )
[wwPDB] Mandatory PDBx/mmCIF format files submission for MX depositions
Mandatory PDBx/mmCIF format files submission for MX depositions ( wwPDB news )
[wwPDB] Conclusion of ORI Misconduct Review Results in Obsoletion of PDB Structures, Paper Retractions
Conclusion of ORI Misconduct Review Results in Obsoletion of PDB Structures, Paper Retractions ( wwPDB news )
Privacy Policy
* See here about the terms and conditions PDBj will not disclose your personal information to third parties without your approval. Personal Information collected Information provided to us on the Contact Us page, such as your name, e-mail address ...
[wwPDB] Time-stamped Copies of the PDB Archive Available
Time-stamped Copies of the PDB Archive Available ( wwPDB news )
[wwPDB] New PDB archive reference paper now in NAR 2019 Database issue
New PDB archive reference paper now in NAR 2019 Database issue ( wwPDB news )
On 17th Nov (Sat), we exhibit a booth at the event "Co-Creation Bureau, Osaka University" (venue: lalaport EXPOCITY, Suita, Osaka, Japan)
Co-Creation Bureau, Osaka University "Enjoy with Osaka Univ." In this event, we exhibit booths and experience corners to introduce various study, result, and resources of Osaka University in the event site. From children to adults, various people can ...
On 10 Nov (Sat) and 11 (Sun), we exhibit a booth in "Science Agora 2018" at Tokyo Odaiba
Science Agora 2018 - in Tokyo - Science Agora is an event to find something fun or curious about science, enjoy and discuss together, and share the experience. In this year, it is held from 9th Nov 2018 (Fri) to 11th Nov 2018 (Sun) (JST). The venue is ...
Molmil 2 has become the default viewer of PDBj web interface from Nov. 1st, 2018
The PDBj web interface uses the beta version of Molmil 2 , an enhanced version of the current Molmil, from November 1st 2018 by default. To keep using the old Molmil 1 interface, please select "Molmil 1" under the default selected viewer on the ...
List of entries replaced with obsolete or other ID - FAQ
Q) Is there the obsoleted/superseded entries list? A) We provide it at PDBj FTP site . See also About contents in PDBj FTP site for more details. [Back to Questions]
[wwPDB] OneDep Improves Support for Deposition of XFEL/SFX Structures
OneDep Improves Support for Deposition of XFEL/SFX Structures ( wwPDB news )
mmJSON files now available from our FTP
The mmJSON files previously accessible via our REST interface are now also accessible from our ftp site. For more information, please refer to our mmJSON help page .
[wwPDB] PDB Certified as a Trustworthy Data Repository
PDB Certified as a Trustworthy Data Repository ( wwPDB news )
[wwPDB] Depositing a Structure? Include Your ORCiD
Depositing a Structure? Include Your ORCiD ( wwPDB news )
[wwPDB] ORCIDs to become mandatory for OneDep contact authors
ORCIDs to become mandatory for OneDep contact authors ( wwPDB news )