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PDB: 16 results

1W2T
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BU of 1w2t by Molmil
beta-fructosidase from Thermotoga maritima in complex with raffinose
Descriptor: BETA FRUCTOSIDASE, CITRIC ACID, SULFATE ION, ...
Authors:Alberto, F, Henrissat, B, Czjzek, M.
Deposit date:2004-07-08
Release date:2005-10-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal Structure of Inactivated Thermotoga Maritima Invertase in Complex with the Trisaccharide Substrate Raffinose.
Biochem.J., 395, 2006
2I58
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BU of 2i58 by Molmil
Crystal Structure of RafE from Streptococcus pneumoniae complexed with raffinose
Descriptor: CHLORIDE ION, Sugar ABC transporter, sugar-binding protein, ...
Authors:Paterson, N.G, Riboldi-Tunnicliffe, A, Mitchell, T.J, Isaacs, N.W.
Deposit date:2006-08-24
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of apo and bound forms of RafE from Streptococcus pneumoniae
To be Published
3ALU
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BU of 3alu by Molmil
Crystal structure of CEL-IV complexed with Raffinose
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Lectin CEL-IV, ...
Authors:Hatakeyama, T, Hozawa, T, Ishii, K, Kamiya, T, Goda, S, Kusunoki, M, Unno, H.
Deposit date:2010-08-07
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Galactose recognition by a tetrameric C-type lectin, CEL-IV, containing the EPN carbohydrate recognition motif
J.Biol.Chem., 286, 2011
3BYN
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BU of 3byn by Molmil
Crystal structure of B. subtilis levansucrase mutant E342A bound to raffinose
Descriptor: CALCIUM ION, Levansucrase, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
Authors:Futterer, K, Meng, G.
Deposit date:2008-01-16
Release date:2008-02-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Donor substrate recognition in the raffinose-bound E342A mutant of fructosyltransferase Bacillus subtilis levansucrase
To be Published
3LIH
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BU of 3lih by Molmil
Crystal structure of fructosyltransferase (D191A) from A. japonicus in complex with raffinose
Descriptor: Fructosyltransferase, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
Authors:Chuankhayan, P, Chen, C.J, Chiang, C.M.
Deposit date:2010-01-24
Release date:2010-05-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of Aspergillus japonicus fructosyltransferase complex with donor/acceptor substrates reveal complete subsites in the active site for catalysis
J.Biol.Chem., 285, 2010
3LRM
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BU of 3lrm by Molmil
Structure of alfa-galactosidase from Saccharomyces cerevisiae with raffinose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Fernandez-Leiro, R, Pereira-Rodriguez, A, Cerdan, M.E, Becerra, M, Sanz-Aparicio, J.
Deposit date:2010-02-11
Release date:2010-06-30
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural analysis of Saccharomyces cerevisiae alpha-galactosidase and its complexes with natural substrates reveals new insights into substrate specificity of GH27 glycosidases.
J.Biol.Chem., 285, 2010
4FNT
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BU of 4fnt by Molmil
Crystal structure of GH36 alpha-galactosidase AgaA A355E D548N from Geobacillus stearothermophilus in complex with raffinose
Descriptor: Alpha-galactosidase AgaA, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
Authors:Merceron, R, Foucault, M, Haser, R, Mattes, R, Watzlawick, H, Gouet, P.
Deposit date:2012-06-20
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The molecular mechanism of the thermostable alpha-galactosidases AgaA and AgaB explained by X-ray crystallography and mutational studies
J.Biol.Chem., 287, 2012
4ZS9
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BU of 4zs9 by Molmil
Raffinose and panose binding protein from Bifidobacterium animalis subsp. lactis Bl-04, bound with raffinose
Descriptor: CHLORIDE ION, MAGNESIUM ION, Sugar binding protein of ABC transporter system, ...
Authors:Fredslund, F, Ejby, M, Andersen, J.M, Slotboom, D.J, Abou Hachem, M.
Deposit date:2015-05-13
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:An ATP Binding Cassette Transporter Mediates the Uptake of alpha-(1,6)-Linked Dietary Oligosaccharides in Bifidobacterium and Correlates with Competitive Growth on These Substrates.
J. Biol. Chem., 291, 2016
4ZZA
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BU of 4zza by Molmil
Raffinose and panose binding protein from Bifidobacterium animalis subsp. lactis Bl-04, bound with raffinose, selenomethionine derivative
Descriptor: Sugar binding protein of ABC transporter system, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
Authors:Fredslund, F, Ejby, M, Andersen, J.M, Slotboom, D.J, Abou Hachem, M.
Deposit date:2015-05-22
Release date:2016-06-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:An ATP Binding Cassette Transporter Mediates the Uptake of alpha-(1,6)-Linked Dietary Oligosaccharides in Bifidobacterium and Correlates with Competitive Growth on These Substrates.
J. Biol. Chem., 291, 2016
5FKC
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BU of 5fkc by Molmil
Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with Raffinose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-FRUCTOFURANOSIDASE, ...
Authors:Ramirez-Escudero, M, Sanz-Aparicio, J.
Deposit date:2015-10-15
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural Analysis of Beta-Fructofuranosidase from Xanthophyllomyces Dendrorhous Reveals Unique Features and the Crucial Role of N-Glycosylation in Oligomerization and Activity
J.Biol.Chem., 291, 2016
5OFX
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BU of 5ofx by Molmil
Plla lectin, trisaccharide complex
Descriptor: CALCIUM ION, PllA, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
Authors:Koehnke, J, Sikandar, A.
Deposit date:2017-07-11
Release date:2017-10-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Photorhabdus luminescens lectin A (PllA): A new probe for detecting alpha-galactoside-terminating glycoconjugates.
J. Biol. Chem., 292, 2017
6EPY
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BU of 6epy by Molmil
Structure of the PBP MelB (Atu4661) in complex with raffinose from A.fabrum C58
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Periplasmic alpha-galactoside-binding protein, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2017-10-12
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
J. Biol. Chem., 293, 2018
6PHX
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BU of 6phx by Molmil
SpAga D472N structure in complex with raffinose
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Alpha-galactosidase, ...
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2019-06-25
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular analysis of an enigmaticStreptococcus pneumoniaevirulence factor: The raffinose-family oligosaccharide utilization system.
J.Biol.Chem., 294, 2019
6PQL
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BU of 6pql by Molmil
SBP RafE in complex with raffinose
Descriptor: ABC transporter sugar-binding protein, beta-D-fructofuranose-(2-1)-[alpha-D-galactopyranose-(1-6)]alpha-D-glucopyranose
Authors:Meier, E.P.W, Boraston, A.B.
Deposit date:2019-07-09
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Molecular analysis of an enigmaticStreptococcus pneumoniaevirulence factor: The raffinose-family oligosaccharide utilization system.
J.Biol.Chem., 294, 2019
7EXJ
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BU of 7exj by Molmil
Crystal structure of alkaline alpha-galctosidase D383A mutant from Arabidopsis thaliana complexed with Raffinose
Descriptor: Probable galactinol--sucrose galactosyltransferase 6, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
Authors:Chuankhayan, P, Guan, H.H, Lin, C.C, Chen, N.C, Huang, Y.C, Yoshimura, M, Nakagawa, A, Lee, R.H, Chen, C.J.
Deposit date:2021-05-27
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural insight into the hydrolase and synthase activities of an alkaline alpha-galactosidase from Arabidopsis from complexes with substrate/product.
Acta Crystallogr D Struct Biol, 79, 2023
8BEU
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BU of 8beu by Molmil
Structure of D188A-fructofuranosidase from Rhodotorula dairenensis in complex with raffinose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-fructofuranosidase, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2022-10-21
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential.
Int J Mol Sci, 23, 2022

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PDB entries from 2024-07-31

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