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PDB: 20 results

1Y2U
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Crystal structure of the common edible mushroom (Agaricus bisporus) lectin in complex with Lacto-N-biose
Descriptor: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, lectin
Authors:Carrizo, M.E, Capaldi, S, Perduca, M, Irazoqui, F.J, Nores, G.A, Monaco, H.L.
Deposit date:2004-11-23
Release date:2004-12-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Antineoplastic Lectin of the Common Edible Mushroom (Agaricus bisporus) Has Two Binding Sites, Each Specific for a Different Configuration at a Single Epimeric Hydroxyl
J.Biol.Chem., 280, 2005
2LL4
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HADDOCK structure of TgMIC4-A5/lacto-N-biose complex, based on NOE-derived distance restraints
Descriptor: Micronemal protein 4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Cowper, B, Matthews, S.
Deposit date:2011-10-26
Release date:2012-04-04
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Galactose Recognition by the Apicomplexan Parasite Toxoplasma gondii.
J.Biol.Chem., 287, 2012
2Z8D
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The galacto-N-biose-/lacto-N-biose I-binding protein (GL-BP) of the ABC transporter from Bifidobacterium longum in complex with lacto-N-biose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Galacto-N-biose/lacto-N-biose I transporter substrate-binding protein, ZINC ION, ...
Authors:Suzuki, R, Wada, J, Katayama, T, Fushinobu, S.
Deposit date:2007-09-05
Release date:2008-03-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and thermodynamic analyses of solute-binding Protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I.
J.Biol.Chem., 283, 2008
4COZ
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Crystal Structure of Epithelial Adhesin 6 A domain (Epa6A) from Candida glabrata in complex with Galb1-3GlcNAc
Descriptor: ACETATE ION, CALCIUM ION, EPITHELIAL ADHESIN 6, ...
Authors:Kock, M, Maestre-Reyna, M, Diderrich, R, Moesch, H.-U, Essen, L.-O.
Deposit date:2014-01-31
Release date:2015-02-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Hotspots Determine Functional Diversity of the Candida Glabrata Epithelial Adhesin Family
J.Biol.Chem., 290, 2015
4CP1
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Crystal Structure of Epithelial Adhesin 9 A domain (Epa9A) from Candida glabrata in complex with Galb1-3GlcNAc
Descriptor: CALCIUM ION, CHLORIDE ION, EPITHELIAL ADHESIN 9, ...
Authors:Kock, M, Maestre-Reyna, M, Diderrich, R, Moesch, H.-U, Essen, L.-O.
Deposit date:2014-01-31
Release date:2015-02-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Functional reprogramming of Candida glabrata epithelial adhesins: the role of conserved and variable structural motifs in ligand binding
To Be Published
4H04
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Lacto-N-biosidase from Bifidobacterium bifidum
Descriptor: Lacto-N-biosidase, SULFATE ION, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Ito, T, Katayama, T, Wada, J, Suzuki, R, Ashida, H, Wakagi, T, Yamamoto, K, Fushinobu, S.
Deposit date:2012-09-07
Release date:2013-03-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of a glycoside hydrolase family 20 lacto-N-biosidase from Bifidobacterium bifidum
J.Biol.Chem., 288, 2013
4WSU
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The crystal structure of hemagglutinin from A/Taiwan/1/2013 in complex with 3'SLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
Authors:Yang, H, Carney, P.J, Chang, J.C, Villanueva, J.M, Stevens, J.
Deposit date:2014-10-28
Release date:2015-02-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and receptor binding preferences of recombinant hemagglutinins from avian and human h6 and h10 influenza a virus subtypes.
J.Virol., 89, 2015
4XBL
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Crystal Structure of Human Galectin-1 in Complex with Type 1 N-acetyllactosamine
Descriptor: Galectin-1, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Hsieh, T.J, Lin, H.Y, Lin, C.H.
Deposit date:2014-12-17
Release date:2015-05-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.931 Å)
Cite:Structural Basis Underlying the Binding Preference of Human Galectins-1, -3 and -7 for Gal beta 1-3/4GlcNAc.
Plos One, 10, 2015
4XBN
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Crystal Structure of Human Galectin-3 CRD in Complex with Type 1 N-acetyllactosamine
Descriptor: Galectin-3, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Hsieh, T.J, Lin, H.Y, Lin, C.H.
Deposit date:2014-12-17
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.208 Å)
Cite:Structural Basis Underlying the Binding Preference of Human Galectins-1, -3 and -7 for Gal beta 1-3/4GlcNAc.
Plos One, 10, 2015
4XBQ
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Crystal Structure of Human Galectin-7 in Complex with Type 1 N-acetyllactosamine
Descriptor: Galectin-7, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Hsieh, T.J, Lin, H.Y, Lin, C.H.
Deposit date:2014-12-17
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.234 Å)
Cite:Structural Basis Underlying the Binding Preference of Human Galectins-1, -3 and -7 for Gal beta 1-3/4GlcNAc.
Plos One, 10, 2015
4YM0
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Crystal structure of the human galectin-4 C-terminal carbohydrate recognition domain in complex with lacto-N-tetraose (LNT)
Descriptor: GLYCEROL, Galectin-4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bum-Erdene, K, Blanchard, H.
Deposit date:2015-03-06
Release date:2015-07-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural characterization of human galectin-4 C-terminal domain: elucidating the molecular basis for recognition of glycosphingolipids, sulfated saccharides and blood group antigens.
Febs J., 282, 2015
5GQF
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Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex
Descriptor: CALCIUM ION, Lacto-N-biosidase, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Yamada, C, Arakawa, T, Katayama, T, Fushinobu, S.
Deposit date:2016-08-07
Release date:2017-04-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum
Cell Chem Biol, 24, 2017
5T7T
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Galectin-8 N terminal domain in complex with LNT
Descriptor: CHLORIDE ION, Galectin-8, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Bohari, M.H, Yu, X, Blanchard, H.
Deposit date:2016-09-05
Release date:2017-01-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structure-based rationale for differential recognition of lacto- and neolacto- series glycosphingolipids by the N-terminal domain of human galectin-8.
Sci Rep, 6, 2016
6D8D
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The crystal structure of hemagglutinin from A/Hong Kong/125/2017 influenza virus in complex with LSTb
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
Authors:Yang, H, Stevens, J.
Deposit date:2018-04-26
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structural and Molecular Characterization of the Hemagglutinin from the Fifth-Epidemic-Wave A(H7N9) Influenza Viruses.
J. Virol., 92, 2018
6H9Y
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Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer capsid protein VP4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Ciges-Tomas, J.R, Gozalbo-Rovira, R, Vila-Vicent, S, Buesa, J, Santiso-Bellon, C, Monedero, V, Yebra, M.J, Rodriguez-Diaz, J, Marina, A.
Deposit date:2018-08-06
Release date:2019-06-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens.
Plos Pathog., 15, 2019
6JYN
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GII.13/21 noroviruses recognize glycans with a terminal beta-galactose via an unconventional glycan binding site
Descriptor: beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, human norovirus P domain protein
Authors:Duan, Z, Xin, C.
Deposit date:2019-04-26
Release date:2019-05-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:GII.13/21 Noroviruses Recognize Glycans with a Terminal beta-Galactose via an Unconventional Glycan Binding Site.
J.Virol., 93, 2019
6KQS
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Crystal Structure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative
Descriptor: GLYCEROL, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, lacto-N-biosidase
Authors:Yamada, C, Arakawa, T, Pichler, M.J, Abou Hachem, M, Fushinobu, S.
Deposit date:2019-08-18
Release date:2020-06-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways.
Nat Commun, 11, 2020
6KQT
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Crystal Structure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein
Descriptor: SODIUM ION, TRIETHYLENE GLYCOL, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yamada, C, Arakawa, T, Pichler, M.J, Abou Hachem, M, Fushinobu, S.
Deposit date:2019-08-18
Release date:2020-06-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways.
Nat Commun, 11, 2020
7V6I
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Crystal structure of lacto-N-biosidase BsaX from Bifidobacterium saguini, lacto-N-biose complex
Descriptor: Lacto-N-biosidase, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Yamada, C, Fushinobu, S.
Deposit date:2021-08-20
Release date:2022-02-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structures of glycoside hydrolase family 136 lacto-N-biosidases from monkey gut- and human adult gut bacteria.
Biosci.Biotechnol.Biochem., 86, 2022
7V6M
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Crystal structure of lacto-N-biosidase TnX from Tynzenella nexilis, lacto-N-biose complex
Descriptor: Fibronectin type III domain-containing protein, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Yamada, C, Fushinobu, S.
Deposit date:2021-08-20
Release date:2022-02-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structures of glycoside hydrolase family 136 lacto-N-biosidases from monkey gut- and human adult gut bacteria.
Biosci.Biotechnol.Biochem., 86, 2022

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