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6JZ4
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b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam
分子名称: (2S,3R,4S,5R)-3,4,5-trihydroxy-6-oxopiperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-03
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.712 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ1
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BU of 6jz1 by Molmil
Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ3
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BU of 6jz3 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin
分子名称: (2~{S},3~{R},4~{R},5~{S})-3,4,5-tris(oxidanyl)piperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-05-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.502 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6QUC
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BU of 6quc by Molmil
Truncated beta-galactosidase III from Bifidobacterium bifidum
分子名称: Beta-galactosidase, CALCIUM ION, IMIDAZOLE
著者Thirup, S.S, Nielsen, J.A, Andersen, J.L, Alsarraf, H, Blaise, M.
登録日2019-02-27
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Truncated beta-galactosidase III from Bifidobacterium bifidum
To Be Published
6QUB
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BU of 6qub by Molmil
Truncated beta-galactosidase III from Bifidobacterium bifidum in complex with galactose
分子名称: Beta-galactosidase, CALCIUM ION, beta-D-galactopyranose
著者Thirup, S.S, Nielsen, J.A, Andersen, J.L, Alsarraf, H, Blaise, M.
登録日2019-02-27
公開日2020-03-18
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Truncated beta-galactosidase III from Bifidobacterium bifidum
To Be Published
6QUD
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BU of 6qud by Molmil
2-deoxy-galactose reaction intermediate of a Truncated beta-galactosidase III from Bifidobacterium bifidum
分子名称: 2-deoxy-alpha-D-galactopyranose, Beta-galactosidase, CALCIUM ION
著者Thirup, S.S, Nielsen, J.A, Andersen, J.L, Alsarraf, H, Blaise, M.
登録日2019-02-27
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Truncated beta-galactosidase III from Bifidobacterium bifidum
To Be Published
6S6Z
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BU of 6s6z by Molmil
Structure of beta-Galactosidase from Thermotoga maritima
分子名称: Beta-galactosidase, MAGNESIUM ION
著者Miguez-Amil, S, Jimenez-Ortega, E, Ramirez Escudero, M, Sanz-Aparicio, J, Fernandez-Leiro, R.
登録日2019-07-04
公開日2020-03-18
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献The cryo-EM Structure ofThermotoga maritimabeta-Galactosidase: Quaternary Structure Guides Protein Engineering.
Acs Chem.Biol., 15, 2020
6SD0
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BU of 6sd0 by Molmil
Structure of beta-galactosidase from Thermotoga maritima.
分子名称: Beta-galactosidase, MAGNESIUM ION
著者Jimenez-Ortega, E, Ramirez-Escudero, M, Sanz-Aparicio, J.
登録日2019-07-26
公開日2020-01-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献The cryo-EM Structure ofThermotoga maritimabeta-Galactosidase: Quaternary Structure Guides Protein Engineering.
Acs Chem.Biol., 15, 2020
6TTE
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BU of 6tte by Molmil
Beta-galactosidase in complex with PETG
分子名称: 2-phenylethyl 1-thio-beta-D-galactopyranoside, Beta-galactosidase, MAGNESIUM ION
著者Saur, M, Hartshorn, M.J, Dong, J, Reeks, J, Bunkoczi, G, Jhoti, H, Williams, P.A.
登録日2019-12-27
公開日2020-01-15
最終更新日2020-03-25
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Fragment-based drug discovery using cryo-EM.
Drug Discov Today, 25, 2020
6TSK
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BU of 6tsk by Molmil
Beta-galactosidase in complex with L-ribose
分子名称: Beta-galactosidase, MAGNESIUM ION, beta-L-ribopyranose
著者Saur, M, Hartshorn, M.J, Dong, J, Reeks, J, Bunkoczi, G, Jhoti, H, Williams, P.A.
登録日2019-12-20
公開日2020-01-08
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Fragment-based drug discovery using cryo-EM.
Drug Discov Today, 25, 2020
6TSH
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BU of 6tsh by Molmil
Beta-galactosidase in complex with deoxygalacto-nojirimycin
分子名称: (2R,3S,4R,5S)-2-(hydroxymethyl)piperidine-3,4,5-triol, Beta-galactosidase, MAGNESIUM ION
著者Saur, M, Hartshorn, M.J, Dong, J, Reeks, J, Bunkoczi, G, Jhoti, H, Williams, P.A.
登録日2019-12-20
公開日2020-01-08
最終更新日2020-03-25
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Fragment-based drug discovery using cryo-EM.
Drug Discov Today, 25, 2020
6NZG
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BU of 6nzg by Molmil
Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine
分子名称: (1S,2R,3S,4S,5S,6R)-2-amino-3,4,5,6-tetrahydroxycyclohexane-1-carboxylic acid, Beta-galactosidase, CALCIUM ION, ...
著者Pellock, S.J, Jariwala, P.B, Redinbo, M.R.
登録日2019-02-13
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Discovering the Microbial Enzymes Driving Drug Toxicity with Activity-Based Protein Profiling.
Acs Chem.Biol., 15, 2020
6U7J
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BU of 6u7j by Molmil
Uncultured Clostridium sp. Beta-glucuronidase
分子名称: Beta-glucuronidase, CALCIUM ION
著者Ervin, S.M, Redinbo, M.R.
登録日2019-09-03
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Gut microbial beta-glucuronidases reactivate estrogens as components of the estrobolome that reactivate estrogens.
J.Biol.Chem., 294, 2019
6U7I
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BU of 6u7i by Molmil
Faecalibacterium prausnitzii Beta-glucuronidase
分子名称: Beta-glucuronidase
著者Ervin, S.M, Redinbo, M.R.
登録日2019-09-03
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Gut microbial beta-glucuronidases reactivate estrogens as components of the estrobolome that reactivate estrogens.
J.Biol.Chem., 294, 2019
6SEB
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BU of 6seb by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with IPTG
分子名称: 1-methylethyl 1-thio-beta-D-galactopyranoside, ACETATE ION, Beta-galactosidase, ...
著者Rutkiewicz, M, Bujacz, A, Kaminska, P, Bujacz, G.
登録日2019-07-29
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.272 Å)
主引用文献Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019
6SEC
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BU of 6sec by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cBon complex with ONPG
分子名称: 2-nitrophenyl beta-D-galactopyranoside, ACETATE ION, Beta-galactosidase, ...
著者Rutkiewicz, M, Bujacz, A, Bujacz, G.
登録日2019-07-29
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.768 Å)
主引用文献Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019
6SEA
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BU of 6sea by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with lactose bound in deep mode
分子名称: ACETATE ION, Beta-galactosidase, SODIUM ION, ...
著者Rutkiewicz, M, Bujacz, A, Bujacz, G.
登録日2019-07-29
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.869 Å)
主引用文献Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019
6SE8
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BU of 6se8 by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, Beta-galactosidase, ...
著者Rutkiewicz, M, Bujacz, A, Bujacz, G.
登録日2019-07-29
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.835 Å)
主引用文献Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019
6SE9
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BU of 6se9 by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with lactose bound in shallow mode
分子名称: ACETATE ION, Beta-galactosidase, FORMIC ACID, ...
著者Rutkiewicz, M, Bujacz, A, Bujacz, G.
登録日2019-07-29
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.965 Å)
主引用文献Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019
6SED
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BU of 6sed by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with galactose
分子名称: ACETATE ION, Beta-galactosidase, FORMIC ACID, ...
著者Rutkiewicz, M, Bujacz, A, Kaminska, P, Bujacz, G.
登録日2019-07-29
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.233 Å)
主引用文献Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019
6HPD
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BU of 6hpd by Molmil
The structure of a beta-glucuronidase from glycoside hydrolase family 2
分子名称: BROMIDE ION, Beta-galactosidase (GH2), MAGNESIUM ION
著者Robb, C.S, Gerlach, N, Reisky, L, Bornshoeru, U, Hehemann, J.H.
登録日2018-09-20
公開日2019-07-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献A marine bacterial enzymatic cascade degrades the algal polysaccharide ulvan.
Nat.Chem.Biol., 15, 2019
6H1P
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BU of 6h1p by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB - data collected at room temperature
分子名称: Beta-galactosidase, SODIUM ION
著者Rutkiewicz, M, Bujacz, A, Bujacz, G.
登録日2018-07-12
公開日2019-06-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.009 Å)
主引用文献Structural features of cold-adapted dimeric GH2 beta-D-galactosidase from Arthrobacter sp. 32cB.
Biochim Biophys Acta Proteins Proteom, 1867, 2019
6D7J
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BU of 6d7j by Molmil
The Crystal Structure of Parabacteroides merdae Beta-Glucuronidase (GUS) with Glycerol in Active-Site
分子名称: Beta-Glucuronidase, GLYCEROL, POTASSIUM ION, ...
著者Little, M.S, Redinbo, M.R.
登録日2018-04-24
公開日2019-05-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Active site flexibility revealed in crystal structures of Parabacteroides merdae beta-glucuronidase from the human gut microbiome.
Protein Sci., 27, 2018
6CXS
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BU of 6cxs by Molmil
Crystal Structure of Clostridium perfringens beta-glucuronidase bound with a novel, potent inhibitor 4-(8-(piperazin-1-yl)-1,2,3,4-tetrahydro-[1,2,3]triazino[4',5':4,5]thieno[2,3-c]isoquinolin-5-yl)morpholine
分子名称: 4-(8-(piperazin-1-yl)-1,2,3,4-tetrahydro-[1,2,3]triazino[4',5':4,5]thieno[2,3-c]isoquinolin-5-yl)morpholine, Beta-glucuronidase, Maltose/maltodextrin-binding periplasmic protein
著者Wallace, B.D, Redinbo, M.R.
登録日2018-04-04
公開日2019-04-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Targeted inhibition of gut bacterial beta-glucuronidase activity enhances anticancer drug efficacy.
Proc.Natl.Acad.Sci.USA, 2020
6NCZ
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Crystal structure of hybrid beta-glucuronidase/beta-galacturonidase from Fusicatenibacter saccharivorans bound to phenyl-thio-beta-D-glucuronide
分子名称: Beta-glucuronidase, GLYCEROL, phenyl 1-thio-beta-D-glucopyranosiduronic acid
著者Walton, W.G, Pellock, S.J, Redinbo, M.R.
登録日2018-12-12
公開日2019-02-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome.
Biochemistry, 58, 2019

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件を2024-05-15に公開中

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