PDB: 69 件ウェブページステータス検索Chemie searchBIRD

---

3KOW	Crystal Structure of ornithine 4,5 aminomutase backsoaked complex 分子名称: 5'-DEOXYADENOSINE, COBALAMIN, D-ornithine aminomutase E component, ... 著者 Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. 登録日 2009-11-14 公開日 2010-01-26 最終更新日 2012-10-24 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KOX	Crystal Structure of ornithine 4,5 aminomutase in complex with 2,4-diaminobutyrate (Anaerobic) 分子名称: (2S)-2-amino-4-{[(1Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}butanoic acid, 5'-DEOXYADENOSINE, COBALAMIN, ... 著者 Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. 登録日 2009-11-14 公開日 2010-01-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KOY	Crystal Structure of ornithine 4,5 aminomutase in complex with ornithine (Aerobic) 分子名称: (E)-N~5~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-ornithine, 5'-DEOXYADENOSINE, COBALAMIN, ... 著者 Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. 登録日 2009-11-14 公開日 2010-01-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KOZ	Crystal Structure of ornithine 4,5 aminomutase in complex with ornithine (Anaerobic) 分子名称: (E)-N~5~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-ornithine, 5'-DEOXYADENOSINE, COBALAMIN, ... 著者 Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. 登録日 2009-11-14 公開日 2010-01-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KP0	Crystal Structure of ORNITHINE 4,5 AMINOMUTASE in complex with 2,4-diaminobutyrate (DAB) (Aerobic) 分子名称: (2S)-2-amino-4-{[(1Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}butanoic acid, 5'-DEOXYADENOSINE, COBALAMIN, ... 著者 Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. 登録日 2009-11-14 公開日 2010-01-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KP1	Crystal structure of ornithine 4,5 aminomutase (Resting State) 分子名称: 5'-DEOXYADENOSINE, COBALAMIN, D-ornithine aminomutase E component, ... 著者 Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. 登録日 2009-11-14 公開日 2010-01-26 最終更新日 2019-10-30 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3REQ	METHYLMALONYL-COA MUTASE, SUBSTRATE-FREE STATE (POOR QUALITY STRUCTURE) 分子名称: ADENOSINE, COBALAMIN, METHYLMALONYL-COA MUTASE 著者 Evans, P.R, Mancia, F. 登録日 1997-12-04 公開日 1998-03-18 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism. Structure, 6, 1998
4JGI	1.5 Angstrom crystal structure of a novel cobalamin-binding protein from Desulfitobacterium hafniense DCB-2 分子名称: CO-METHYLCOBALAMIN, Putative uncharacterized protein 著者 Sjuts, H, Dunstan, M.S, Fisher, K, Leys, D. 登録日 2013-03-01 公開日 2013-08-07 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of the cobalamin-binding protein of a putative O-demethylase from Desulfitobacterium hafniense DCB-2. Acta Crystallogr.,Sect.D, 69, 2013
4Q37	Crystal structure of the hypothetical protein TM0182 Thermotoga maritima, N-terminal domain. 分子名称: PLATINUM (II) ION, Radical SAM protein 著者 Hocker, B, Farias-Rico, J.A. 登録日 2014-04-11 公開日 2014-07-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.19 Å) 主引用文献 Evolutionary relationship of two ancient protein superfolds. Nat.Chem.Biol., 10, 2014
4R3U	Crystal structure of 2-Hydroxyisobutyryl-CoA Mutase 分子名称: 2-hydroxyisobutyryl-CoA mutase large subunit, 2-hydroxyisobutyryl-CoA mutase small subunit, 3-HYDROXYBUTANOYL-COENZYME A, ... 著者 Zahn, M, Kurteva-Yaneva, N, Rohwerder, T, Straeter, N. 登録日 2014-08-18 公開日 2015-03-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of the stereospecificity of bacterial B12-dependent 2-hydroxyisobutyryl-CoA mutase. J.Biol.Chem., 290, 2015
4REQ	Methylmalonyl-COA Mutase substrate complex 分子名称: 5'-DEOXYADENOSINE, COBALAMIN, GLYCEROL, ... 著者 Evans, P.R, Mancia, F. 登録日 1998-06-17 公開日 1999-01-13 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism. Structure, 6, 1998
4XC6	Isobutyryl-CoA mutase fused with bound adenosylcobalamin, GDP, and Mg (holo-IcmF/GDP) 分子名称: 5'-DEOXYADENOSINE, ACETATE ION, COBALAMIN, ... 著者 Jost, M, Drennan, C.L. 登録日 2014-12-17 公開日 2015-02-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Visualization of a radical B12 enzyme with its G-protein chaperone. Proc.Natl.Acad.Sci.USA, 112, 2015
4XC7	Isobutyryl-CoA mutase fused with bound butyryl-CoA and without cobalamin or GDP (apo-IcmF) 分子名称: Butyryl Coenzyme A, Isobutyryl-CoA mutase fused, L(+)-TARTARIC ACID 著者 Jost, M, Drennan, C.L. 登録日 2014-12-17 公開日 2015-02-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Visualization of a radical B12 enzyme with its G-protein chaperone. Proc.Natl.Acad.Sci.USA, 112, 2015
4XC8	Isobutyryl-CoA mutase fused with bound butyryl-CoA, GDP, and Mg and without cobalamin (apo-IcmF/GDP) 分子名称: Butyryl Coenzyme A, GUANOSINE-5'-DIPHOSPHATE, Isobutyryl-CoA mutase fused, ... 著者 Jost, M, Drennan, C.L. 登録日 2014-12-17 公開日 2015-02-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Visualization of a radical B12 enzyme with its G-protein chaperone. Proc.Natl.Acad.Sci.USA, 112, 2015
5CJT	Isobutyryl-CoA mutase fused with bound adenosylcobalamin, GDP, Mg (holo-IcmF/GDP), and substrate isobutyryl-coenzyme A 分子名称: 5'-DEOXYADENOSINE, COBALAMIN, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Jost, M, Drennan, C.L. 登録日 2015-07-15 公開日 2015-09-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural Basis for Substrate Specificity in Adenosylcobalamin-dependent Isobutyryl-CoA Mutase and Related Acyl-CoA Mutases. J.Biol.Chem., 290, 2015
5CJU	Isobutyryl-CoA mutase fused with bound adenosylcobalamin, GDP, Mg (holo-IcmF/GDP), and substrate n-butyryl-coenzyme A 分子名称: 5'-DEOXYADENOSINE, Butyryl Coenzyme A, COBALAMIN, ... 著者 Jost, M, Drennan, C.L. 登録日 2015-07-15 公開日 2015-09-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural Basis for Substrate Specificity in Adenosylcobalamin-dependent Isobutyryl-CoA Mutase and Related Acyl-CoA Mutases. J.Biol.Chem., 290, 2015
5CJV	Isobutyryl-CoA mutase fused with bound adenosylcobalamin, GDP, Mg (holo-IcmF/GDP), and substrate isovaleryl-coenzyme A 分子名称: 5'-DEOXYADENOSINE, COBALAMIN, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Jost, M, Drennan, C.L. 登録日 2015-07-15 公開日 2015-09-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Structural Basis for Substrate Specificity in Adenosylcobalamin-dependent Isobutyryl-CoA Mutase and Related Acyl-CoA Mutases. J.Biol.Chem., 290, 2015
5CJW	Isobutyryl-CoA mutase fused with bound adenosylcobalamin, GDP, Mg (holo-IcmF/GDP), and substrate pivalyl-coenzyme A 分子名称: 5'-DEOXYADENOSINE, COBALAMIN, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Jost, M, Drennan, C.L. 登録日 2015-07-15 公開日 2015-09-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural Basis for Substrate Specificity in Adenosylcobalamin-dependent Isobutyryl-CoA Mutase and Related Acyl-CoA Mutases. J.Biol.Chem., 290, 2015
5REQ	Methylmalonyl-COA MUTASE, Y89F Mutant, substrate complex 分子名称: COBALAMIN, GLYCEROL, METHYLMALONYL(CARBADETHIA)-COENZYME A, ... 著者 Evans, P.R, Thomae, N.H. 登録日 1998-08-03 公開日 1998-08-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Stabilization of radical intermediates by an active-site tyrosine residue in methylmalonyl-CoA mutase. Biochemistry, 37, 1998
6H9E	Structure of glutamate mutase reconstituted with homo-coenzyme B12 分子名称: (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-ethyl-oxolane-3,4-diol, COBALAMIN, D(-)-TARTARIC ACID, ... 著者 Gruber, K, Csitkovits, V, Kratky, C. 登録日 2018-08-03 公開日 2019-08-14 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Structure-Based Demystification of Radical Catalysis by a Coenzyme B 12 Dependent Enzyme-Crystallographic Study of Glutamate Mutase with Cofactor Homologues. Angew.Chem.Int.Ed.Engl., 61, 2022
6H9F	Structure of glutamate mutase reconstituted with bishomo-coenzyme B12 分子名称: (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-propyl-oxolane-3,4-diol, COBALAMIN, D(-)-TARTARIC ACID, ... 著者 Gruber, K, Csitkovits, V, Kratky, C. 登録日 2018-08-03 公開日 2019-08-14 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure-Based Demystification of Radical Catalysis by a Coenzyme B 12 Dependent Enzyme-Crystallographic Study of Glutamate Mutase with Cofactor Homologues. Angew.Chem.Int.Ed.Engl., 61, 2022
6OXC	Structure of Mycobacterium tuberculosis methylmalonyl-CoA mutase with adenosyl cobalamin 分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Methylmalonyl-CoA mutase large subunit, ... 著者 Purchal, M, Ruetz, M, Banerjee, R, Koutmos, M. 登録日 2019-05-13 公開日 2019-11-13 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Itaconyl-CoA forms a stable biradical in methylmalonyl-CoA mutase and derails its activity and repair. Science, 366, 2019
6OXD	Structure of Mycobacterium tuberculosis methylmalonyl-CoA mutase with adenosyl cobalamin 分子名称: 5'-DEOXYADENOSINE, COBALAMIN, Itaconyl coenzyme A, ... 著者 Purchal, M, Ruetz, M, Banerjee, R, Koutmos, M. 登録日 2019-05-13 公開日 2019-11-13 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Itaconyl-CoA forms a stable biradical in methylmalonyl-CoA mutase and derails its activity and repair. Science, 366, 2019
6REQ	METHYLMALONYL-COA MUTASE, 3-CARBOXYPROPYL-COA INHIBITOR COMPLEX 分子名称: 3-CARBOXYPROPYL-COENZYME A, COBALAMIN, GLYCEROL, ... 著者 Evans, P.R, Mancia, F. 登録日 1998-09-03 公開日 1999-09-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of substrate complexes of methylmalonyl-CoA mutase. Biochemistry, 38, 1999
6WTE	Structure of radical S-adenosylmethionine methyltransferase, TsrM, from Kitasatospora setae with cobalamin and [4Fe-4S] cluster bound 分子名称: 1,2-ETHANEDIOL, B12-binding domain-containing protein, COBALAMIN, ... 著者 Knox, H.L, Chen, P.Y.-T, Drennan, C.L, Booker, S.J. 登録日 2020-05-02 公開日 2020-12-23 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Structural basis for non-radical catalysis by TsrM, a radical SAM methylase. Nat.Chem.Biol., 17, 2021

<123>