PDB: 46 件ウェブページステータス検索Chemie searchBIRD

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1K6F	Crystal Structure of the Collagen Triple Helix Model [(Pro-Pro-Gly)10]3 分子名称: collagen triple helix 著者 Berisio, R, Vitagliano, L, Mazzarella, L, Zagari, A. 登録日 2001-10-16 公開日 2002-01-30 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3) Protein Sci., 11, 2002
1PWB	High resolution crystal structure of an active recombinant fragment of human lung surfactant protein D with maltose 分子名称: CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-glucopyranose, ... 著者 Shrive, A.K, Tharia, H.A, Strong, P, Kishore, U, Burns, I, Rizkallah, P.J, Reid, K.B, Greenhough, T.J. 登録日 2003-07-01 公開日 2003-08-05 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 High-resolution structural insights into ligand binding and immune cell recognition by human lung surfactant protein D J.Mol.Biol., 331, 2003
1PW9	High resolution crystal structure of an active recombinant fragment of human lung surfactant protein D 分子名称: CALCIUM ION, Pulmonary surfactant-associated protein D 著者 Shrive, A.K, Tharia, H.A, Strong, P, Kishore, U, Burns, I, Rizkallah, P.J, Reid, K.B, Greenhough, T.J. 登録日 2003-07-01 公開日 2003-08-05 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 High resolution structural insights into ligand binding and immune cell recognition by human lung surfactant protein D J.Mol.Biol., 331, 2003
1Q7D	Structure of the integrin alpha2beta1 binding collagen peptide 分子名称: collagen alfa 1(I) chain peptide GPOGPOGFOGERGPOGPOGPO 著者 Emsley, J, Knight, C.G, Farndale, R.W, Barnes, M.J. 登録日 2003-08-18 公開日 2004-01-13 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of the Integrin alpha2beta1-binding Collagen Peptide. J.Mol.Biol., 335, 2004
1WCK	Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore. 分子名称: BCLA PROTEIN, CACODYLATE ION 著者 Rety, S, Salamitou, S, Augusto, L.A, Chaby, R, Lehegarat, F, Lewit-Bentley, A. 登録日 2004-11-17 公開日 2005-10-25 最終更新日 2019-03-06 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 The Crystal Structure of the Bacillus Anthracis Spore Surface Protein Bcla Shows Remarkable Similarity to Mammalian Proteins. J.Biol.Chem., 280, 2005
1YM8	crystal structure of GZZ shows up puckering of the proline ring in the Xaa position. 分子名称: collagen gly-4(R)hyp-4(R)hyp 著者 Schumacher, M.A, Mizuno, K, Bachinger, H.P. 登録日 2005-01-20 公開日 2005-04-19 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 The crystal structure of the collagen-like polypeptide (glycyl-4(R)-hydroxyprolyl-4(R)-hydroxyprolyl)9 at 1.55 A resolution shows up-puckering of the proline ring in the Xaa position. J.Biol.Chem., 280, 2005
1WZB	Crystal structure of the collagen triple helix model [{HYP(R)-HYP(R)-GLY}10]3 分子名称: Collagen triple helix 著者 Kawahara, K, Nakamura, S, Nishi, Y, Uchiyama, S, Nishiuchi, Y, Nakazawa, T, Ohkubo, T, Kobayashi, Y. 登録日 2005-03-03 公開日 2006-01-31 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Effect of hydration on the stability of the collagen-like triple-helical structure of [4(R)-hydroxyprolyl-4(R)-hydroxyprolylglycine]10 Biochemistry, 44, 2005
1X1K	Host-guest peptide (Pro-Pro-Gly)4-(Pro-alloHyp-Gly)-(Pro-Pro-Gly)4 分子名称: Host-guest peptide (Pro-Pro-Gly)4-(Pro-alloHyp-Gly)-(Pro-Pro-Gly)4 著者 Jiravanichanun, N, Hongo, C, Wu, G, Noguchi, K, Okuyama, K, Nishino, N, Silva, T. 登録日 2005-04-05 公開日 2005-06-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Unexpected puckering of hydroxyproline in the guest triplets, hyp-pro-gly and pro-allohyp-gly sandwiched between pro-pro-gly sequence Chembiochem, 6, 2005
2CUO	Collagen model peptide (PRO-PRO-GLY)9 分子名称: COLLAGEN MODEL PEPTIDE (PRO-PRO-GLY)9 著者 Hongo, C, Noguchi, K, Okuyama, K, Tanaka, Y, Nishino, N. 登録日 2005-05-27 公開日 2005-06-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.33 Å) 主引用文献 Repetitive interactions observed in the crystal structure of a collagen-model peptide, [(Pro-Pro-Gly)9]3 J.Biochem.(Tokyo), 138, 2005
2D3F	Crystal structures of collagen model peptides (Pro-Pro-Gly)4-Pro-Hyp-Gly-(Pro-Pro-Gly)4 分子名称: COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-PRO-HYP-GLY-(PRO-PRO-GLY)4 著者 Wu, G, Noguchi, K, Okuyama, K, Ebisuzaki, S, Nishino, N. 登録日 2005-09-27 公開日 2006-09-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering. Biopolymers, 91, 2009
2D3H	Crystal structures of collagen model peptides (Pro-Pro-Gly)4-Hyp-Hyp-Gly-(Pro-Pro-Gly)4 分子名称: COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-HYP-HYP-GLY-(PRO-PRO-GLY)4 著者 Wu, G, Noguchi, K, Okuyama, K, Mizuno, K, Bachinger, H.P. 登録日 2005-09-28 公開日 2006-09-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering. Biopolymers, 91, 2009
2F6A	Collagen Adhesin and Collagen Complex Structure 分子名称: Collagen, Collagen adhesin 著者 Zong, Y, Narayana, S.L.V. 登録日 2005-11-28 公開日 2006-12-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.29 Å) 主引用文献 A 'Collagen Hug' model for Staphylococcus aureus CNA binding to collagen. Embo J., 24, 2005
3DMW	Crystal structure of human type III collagen G982-G1023 containing C-terminal cystine knot 分子名称: Collagen alpha-1(III) chain 著者 Boudko, S.P, Engel, J, Okuyama, K, Mizuno, K, Bachinger, H.P, Schumacher, M.A. 登録日 2008-07-01 公開日 2008-09-30 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of human type III collagen Gly991-Gly1032 cystine knot-containing peptide shows both 7/2 and 10/3 triple helical symmetries. J.Biol.Chem., 283, 2008
2V53	Crystal structure of a SPARC-collagen complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, COLLAGEN ALPHA-1(III) CHAIN, ... 著者 Hohenester, E, Sasaki, T, Giudici, C, Farndale, R.W, Bachinger, H.P. 登録日 2008-10-01 公開日 2008-11-25 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural Basis of Sequence-Specific Collagen Recognition by Sparc. Proc.Natl.Acad.Sci.USA, 105, 2008
3GXE	Complex of a Low Affinity Collagen Site with the Fibronectin 8-9FnI Domain Pair 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Collagen alpha-1(I) chain, Fibronectin, ... 著者 Sladek, B, Campbell, I.D, Vakonakis, I. 登録日 2009-04-02 公開日 2010-04-07 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural analysis of collagen type I interactions with human fibronectin reveals a cooperative binding mode J.Biol.Chem., 288, 2013
3HR2	Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, post rigid body refinement, 'relaxed' 分子名称: Collagen alpha-1(I) chain, Collagen alpha-2(I) chain 著者 Orgel, J.P. 登録日 2009-06-08 公開日 2009-07-14 最終更新日 2024-02-21 実験手法 FIBER DIFFRACTION (5.16 Å) 主引用文献 Microfibrillar Structure of Type I Collagen in Situ. Proc.Natl.Acad.Sci.USA, 103, 2006
3HQV	Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, rigid body refinement 分子名称: Collagen alpha-1(I) chain, Collagen alpha-2(I) chain 著者 Orgel, J.P. 登録日 2009-06-08 公開日 2009-07-14 最終更新日 2024-02-21 実験手法 FIBER DIFFRACTION (5.16 Å) 主引用文献 Microfibrillar Structure of Type I Collagen in Situ Proc.Natl.Acad.Sci.USA, 103, 2006
3IKP	Crystal structure of inositol phosphate bound trimeric human lung surfactant protein D 分子名称: CALCIUM ION, D-MYO-INOSITOL-1-PHOSPHATE, Pulmonary surfactant-associated protein D 著者 Shrive, A.K, Greenhough, T.J. 登録日 2009-08-06 公開日 2009-11-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural characterisation of ligand-binding determinants in human lung surfactant protein D: influence of Asp325 J.Mol.Biol., 394, 2009
3IKN	Crystal structure of galactose bound trimeric human lung surfactant protein D 分子名称: CALCIUM ION, Pulmonary surfactant-associated protein D, beta-D-galactopyranose 著者 Shrive, A.K, Greenhough, T.J. 登録日 2009-08-06 公開日 2009-11-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural characterisation of ligand-binding determinants in human lung surfactant protein D: influence of Asp325 J.Mol.Biol., 394, 2009
3IKR	Crystal structure of alpha 1-4 mannobiose bound trimeric human lung surfactant protein D 分子名称: CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-mannopyranose 著者 Shrive, A.K, Greenhough, T.J. 登録日 2009-08-06 公開日 2009-11-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural characterisation of ligand-binding determinants in human lung surfactant protein D: influence of Asp325 J.Mol.Biol., 394, 2009
3IKQ	Crystal structure of alpha 1-2 mannobiose bound trimeric human lung surfactant protein D 分子名称: CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-mannopyranose 著者 Shrive, A.K, Greenhough, T.J. 登録日 2009-08-06 公開日 2009-11-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural characterisation of ligand-binding determinants in human lung surfactant protein D: influence of Asp325 J.Mol.Biol., 394, 2009
3AH9	Crystal structure of (Pro-Pro-Gly)9 at 1.1 A resolution 分子名称: ACETIC ACID, AZIDE ION, collagen-like peptide 著者 Okuyama, K, Morimoto, T, Hongo, C, Hosaka, N, Nishino, N. 登録日 2010-04-22 公開日 2011-04-06 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.08 Å) 主引用文献 Crystal structure of (Pro-Pro-Gly)9 To be Published
3AI6	Triple-helical structure of (D-Pro-D-Pro-Gly)9 at 1.1 A resolution 分子名称: collagen-like peptide 著者 Okuyama, K, Miyama, K, Kawaguchi, T, Nishino, N. 登録日 2010-05-10 公開日 2011-04-27 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Triple-helical structure of (D-Pro-D-Pro-Gly)9 To be Published
3B0S	Crystal Structure of (Gly-Pro-Hyp)9 分子名称: collagen-like peptide 著者 Okuyama, K, Miyama, K, Mizuno, K, Bachinger, H.P. 登録日 2011-06-14 公開日 2012-05-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal structure of (Gly-Pro-Hyp)(9) : Implications for the collagen molecular model. Biopolymers, 97, 2012
3B2C	Crystal structure of the collagen triple helix model [{PRO-HYP(R)-GLY}4-{HYP(S)-Pro-GLY}2-{PRO-HYP(R)-GLY}4]3 分子名称: Collagen-like peptide 著者 Motooka, D, Kawahara, K, Nakamura, S, Doi, M, Nishi, Y, Nishiuchi, Y, Nakazawa, T, Yoshida, T, Ohkubo, T, Kobayashi, Y, Kang, Y.K, Uchiyama, S. 登録日 2011-07-26 公開日 2012-04-04 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 The triple helical structure and stability of collagen model peptide with 4(S)-hydroxyprolyl-pro-gly units Biopolymers, 98, 2011

 

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