PDB: 87 件ウェブページステータス検索Chemie searchBIRD

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4ERH	The crystal structure of OmpA domain of OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 分子名称: GLYCEROL, Outer membrane protein A, SULFATE ION 著者 Tan, K, Wu, R, Jedrzejczak, R, Adkins, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP) 登録日 2012-04-20 公開日 2012-05-02 最終更新日 2015-04-01 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 The crystal structure of OmpA domain of OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S To be Published
5VES	The 2.4A crystal structure of OmpA domain of OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 分子名称: Outer membrane protein A, SULFATE ION 著者 Tan, K, Wu, R, Jedrzejczak, R, Adkins, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP) 登録日 2017-04-05 公開日 2017-04-19 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi. Protein Sci., 26, 2017
7RJJ	Crystal Structure of the Peptidoglycan Binding Domain of the Outer Membrane Protein (OmpA) from Klebsiella pneumoniae with bound D-alanine 分子名称: CHLORIDE ION, D-ALANINE, OmpA family protein 著者 Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2021-07-21 公開日 2021-07-28 最終更新日 2023-06-14 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae. Microbiol Resour Announc, 12, 2023
1OAP	Mad structure of the periplasmique domain of the Escherichia coli PAL protein 分子名称: PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN, SULFATE ION 著者 Abergel, C, Walburger, A, Bouveret, E, Claverie, J.M. 登録日 2003-01-20 公開日 2004-02-13 最終更新日 2019-10-09 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Crystallization and preliminary crystallographic study of the peptidoglycan-associated lipoprotein from Escherichia coli. Acta Crystallogr.,Sect.D, 57, 2001
7BBA	Structure of the TagL peptidoglycan binding domain from EAEC T6SS 分子名称: Putative type VI secretion protein, SULFATE ION 著者 Nguyen, V.S, Cambillau, C, Leone, P. 登録日 2020-12-17 公開日 2021-08-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Anchoring the T6SS to the cell wall: Crystal structure of the peptidoglycan binding domain of the TagL accessory protein. Plos One, 16, 2021
1R1M	Structure of the OmpA-like domain of RmpM from Neisseria meningitidis 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer membrane protein class 4 著者 Grizot, S, Buchanan, S.K. 登録日 2003-09-24 公開日 2004-05-11 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of the OmpA-like domain of RmpM from Neisseria meningitidis Mol.Microbiol., 51, 2004
5U1H	Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa 分子名称: (2R,6S)-2-amino-6-(carboxyamino)-7-{[(1R)-1-carboxyethyl]amino}-7-oxoheptanoic acid, ACETATE ION, CHLORIDE ION, ... 著者 Watanabe, N, Stogios, P.J, Skarina, T, Wawrzak, Z, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2016-11-28 公開日 2017-01-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa To be published
5JIR	Crystal structure of Treponema pallidum protein Tp0624 分子名称: CHLORIDE ION, GLYCEROL, OOP family OmpA-OmpF porin 著者 Parker, M.L, Boulanger, M.J. 登録日 2016-04-22 公開日 2016-11-23 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Structure of Treponema pallidum Tp0624 Reveals a Modular Assembly of Divergently Functionalized and Previously Uncharacterized Domains. Plos One, 11, 2016
2AIZ	Solution structure of peptidoglycan associated lipoprotein from Haemophilus influenza bound to UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine 分子名称: L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine, N-acetyl-beta-muramic acid, Outer membrane protein P6 (Fragment), ... 著者 Parsons, L.M, Lin, F, Orban, J, Structure 2 Function Project (S2F) 登録日 2005-08-01 公開日 2006-03-14 最終更新日 2023-02-15 実験手法 SOLUTION NMR 主引用文献 Peptidoglycan recognition by pal, an outer membrane lipoprotein. Biochemistry, 45, 2006
6TOP	Structure of the PorE C-terminal domain, a protein of T9SS from Porphyromonas gingivalis 分子名称: GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA, OmpA family protein, SODIUM ION 著者 Trinh, T.N, Cambillau, C, Roussel, A, Leone, P. 登録日 2019-12-11 公開日 2020-06-17 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal structure of Type IX secretion system PorE C-terminal domain from Porphyromonas gingivalis in complex with a peptidoglycan fragment. Sci Rep, 10, 2020
4B62	The structure of the cell wall anchor of the T6SS from Pseudomonas aeruginosa 分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, TSSL1 著者 Robb, C.S, Carlson, M, Nano, F.E, Boraston, A.B. 登録日 2012-08-08 公開日 2013-10-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal Structure of the Periplasmic Peptidoglycan Binding Anchor of a T6Ss from Pseudomonas Aeruginosa. To be Published
3LDT	Crystal structure of an Outer membrane protein(OmpA)from Legionella pneumophila 分子名称: GLYCEROL, Outer membrane protein, OmpA family protein 著者 Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2010-01-13 公開日 2010-02-02 最終更新日 2021-02-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of an Outer membrane protein(OmpA)from Legionella pneumophila To be Published
5N2C	Crystal structure of the peptidoglycan-associated lipoprotein from Burkholderia cenocepacia 分子名称: 1,2-ETHANEDIOL, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, ACETATE ION, ... 著者 Matterazzo, E, Bolognesi, M, Gourlay, L.J. 登録日 2017-02-07 公開日 2017-07-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Designing Probes for Immunodiagnostics: Structural Insights into an Epitope Targeting Burkholderia Infections. ACS Infect Dis, 3, 2017
6U83	OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-ALANINE, Outer membrane associated protein, ... 著者 Michalska, K, Skarina, T, Stogios, P.J, Di Leo, R, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2019-09-04 公開日 2019-09-18 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.3566 Å) 主引用文献 OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4 To Be Published
3WPW	Structure of PomBc5, a periplasmic fragment of PomB from Vibrio 分子名称: ACETATE ION, PomB 著者 Takao, M, Sakuma, M, Zhu, S, Homma, M, Kojima, S, Imada, K. 登録日 2014-01-17 公開日 2014-09-10 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Conformational change in the periplasmic region of the flagellar stator coupled with the assembly around the rotor Proc. Natl. Acad. Sci. U.S.A., 111, 2014
3IMP	New crystal form of the C-terminal domain of Helicobacter pylori MotB (residues 125-256) 分子名称: CHLORIDE ION, Chemotaxis protein motB, NICKEL (II) ION 著者 Roujeinikova, A. 登録日 2009-08-11 公開日 2010-08-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystallographic and Molecular Dynamics Analysis of Loop Motions Unmasking the Peptidoglycan-Binding Site in Stator Protein MotB of Flagellar Motor Plos One, 6, 2011
5NHX	Periplasmic domain of Outer Membrane Protein A from Klebsiella pneumoniae 分子名称: CITRIC ACID, Outer membrane protein A 著者 Demange, P, Tranier, S, Nars, G, Iordanov, I, Mourey, L, Saurel, O, Milon, A. 登録日 2017-03-22 公開日 2018-05-16 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structure and dynamics of the C-terminal domain of OmpA from Klebsiella pneumonia To Be Published
4B5C	Crystal structure of the peptidoglycan-associated lipoprotein from Burkholderia pseudomallei 分子名称: ACETATE ION, PUTATIVE OMPA FAMILY LIPOPROTEIN 著者 Gourlay, L.J, Peri, C, Conchillo-Sole, O, Ferrer-Navarro, M, Gori, A, Longhi, R, Rinchai, D, Lertmemongkolchai, G, Lassaux, P, Daura, X, Colombo, G, Bolognesi, M. 登録日 2012-08-03 公開日 2013-08-14 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Exploiting the Burkholderia Pseudomallei Acute Phase Antigen Bpsl2765 for Structure-Based Epitope Discovery/Design in Structural Vaccinology. Chem.Biool., 20, 2013
5M38	Structure of the TagL peptidoglycan binding domain from EAEC T6SS 分子名称: OmpA family protein 著者 Cambillau, C, Nguyen, V.S, Spinelli, S, Cascales, E. 登録日 2016-10-14 公開日 2018-02-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of the TagL peptidoglycan binding domain from EAEC T6SS To Be Published
3WPX	Structure of PomBc4, a periplasmic fragment of PomB from Vibrio alginolyticus 分子名称: PomB 著者 Takao, M, Sakuma, M, Zhu, S, Homma, M, Kojima, S, Imada, K. 登録日 2014-01-17 公開日 2014-09-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Conformational change in the periplasmic region of the flagellar stator coupled with the assembly around the rotor Proc. Natl. Acad. Sci. U.S.A., 111, 2014
3CYP	The crystal structure of the C-terminal domain of Helicobacter pylori MotB (residues 125-256). 分子名称: Chemotaxis protein motB 著者 Roujeinikova, A. 登録日 2008-04-26 公開日 2008-07-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of the cell wall anchor domain of MotB, a stator component of the bacterial flagellar motor: implications for peptidoglycan recognition. Proc.Natl.Acad.Sci.Usa, 105, 2008
3CYQ	The crystal structure of the complex of the C-terminal domain of Helicobacter pylori MotB (residues 125-256) with N-acetylmuramic acid 分子名称: Chemotaxis protein motB, N-acetyl-beta-muramic acid 著者 Roujeinikova, A. 登録日 2008-04-26 公開日 2008-07-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the cell wall anchor domain of MotB, a stator component of the bacterial flagellar motor: implications for peptidoglycan recognition. Proc.Natl.Acad.Sci.Usa, 2008
5LKW	Crystal structure of the peptidoglycan-associated lipoprotein (Pal) from Burkholderia cepacia in complex with DAP 分子名称: 2,6-DIAMINOPIMELIC ACID, Putative OmpA family lipoprotein 著者 Romano, M, Ruggiero, A, Berisio, R. 登録日 2016-07-25 公開日 2017-08-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The Burkholderia cenocepacia peptidoglycan-associated lipoprotein is involved in epithelial cell attachment and elicitation of inflammation. Cell. Microbiol., 19, 2017
3KHN	Crystal structure of putative MotB like protein DVU_2228 from Desulfovibrio vulgaris. 分子名称: MotB protein, putative 著者 Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2009-10-30 公開日 2009-12-01 最終更新日 2021-02-10 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Crystal structure of putative MotB like protein DVU_2228 from Desulfovibrio vulgaris To be Published
3TD5	Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala 分子名称: CHLORIDE ION, Outer membrane protein omp38, peptide(L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala) 著者 Park, J.S, Lee, W.C, Song, J.H, Kim, H.Y. 登録日 2011-08-10 公開日 2011-10-26 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane Faseb J., 26, 2012

 

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