8THE
 
 | | Cryo-EM structure of Pseudomonas aeruginosa TonB-dependent transporter PhuR in complex with synthetic antibody and heme | | 分子名称: | (2~{R},4~{R},5~{S},6~{S})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[[(2~{R},3~{S},4~{S},5~{R},6~{S})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{R},4~{R},5~{S},6~{S})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{S})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-4,5-bis(oxidanyl)oxane-2-carboxylic acid, Heme/hemoglobin uptake outer membrane receptor PhuR, PROTOPORPHYRIN IX CONTAINING FE, ... | | 著者 | Knejski, P, Erramilli, S.K, Kossiakoff, A.A. | | 登録日 | 2023-07-15 | | 公開日 | 2024-01-31 | | 最終更新日 | 2024-04-17 | | 実験手法 | ELECTRON MICROSCOPY (2.5 Å) | | 主引用文献 | Chaperone-assisted cryo-EM structure of P. aeruginosa PhuR reveals molecular basis for heme binding.
Structure, 32, 2024
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8BMX
 | | Bacteroides thetaiotaomicron B12 TonB dependent transporter in complex with a surface lipoprotein | | 分子名称: | Putative TonB-linked outer membrane receptor, YncE family protein | | 著者 | Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B. | | 登録日 | 2022-11-11 | | 公開日 | 2023-09-20 | | 実験手法 | X-RAY DIFFRACTION (3.72 Å) | | 主引用文献 | BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
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8BLW
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8AA3
 | | Core SusCD transporter units from the inactive levan utilisome in the presence of levan fructo-oligosaccharides DP 15-25 | | 分子名称: | MAGNESIUM ION, SusC homolog, SusD homolog, ... | | 著者 | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | | 登録日 | 2022-06-29 | | 公開日 | 2023-06-07 | | 最終更新日 | 2023-06-21 | | 実験手法 | ELECTRON MICROSCOPY (2.7 Å) | | 主引用文献 | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
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8A9Y
 | | Substrate-free levan utilisation machinery (utilisome) | | 分子名称: | DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ... | | 著者 | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | | 登録日 | 2022-06-29 | | 公開日 | 2023-06-07 | | 最終更新日 | 2023-06-21 | | 実験手法 | ELECTRON MICROSCOPY (3.5 Å) | | 主引用文献 | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
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8AA1
 | | Core SusCD transporter units from the levan utilisome with levan fructo-oligosaccharides DP 8-12 | | 分子名称: | MAGNESIUM ION, SusC homolog, SusD homolog, ... | | 著者 | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | | 登録日 | 2022-06-29 | | 公開日 | 2023-06-07 | | 最終更新日 | 2023-06-21 | | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | | 主引用文献 | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
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8AA0
 | | Levan utilisation machinery (utilisome) with levan fructo-oligosaccharides DP 8-12 | | 分子名称: | DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ... | | 著者 | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | | 登録日 | 2022-06-29 | | 公開日 | 2023-06-07 | | 最終更新日 | 2023-06-21 | | 実験手法 | ELECTRON MICROSCOPY (3.2 Å) | | 主引用文献 | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
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8AA2
 | | Inactive levan utilisation machinery (utilisome) in the presence of levan fructo-oligosaccharides DP 15-25 | | 分子名称: | DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ... | | 著者 | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | | 登録日 | 2022-06-29 | | 公開日 | 2023-06-07 | | 最終更新日 | 2023-06-21 | | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | | 主引用文献 | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
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8B43
 | | Crystal structure of ferrioxamine transporter | | 分子名称: | 1,12-bis(oxidanyl)-1,6,12,17-tetrazacyclodocosane-2,5,13,16-tetrone, FE (III) ION, Ferrichrome-iron receptor, ... | | 著者 | Josts, I, Tidow, H. | | 登録日 | 2022-09-19 | | 公開日 | 2023-04-26 | | 最終更新日 | 2024-02-07 | | 実験手法 | X-RAY DIFFRACTION (2.49 Å) | | 主引用文献 | Interactions of TonB-dependent transporter FoxA with siderophores and antibiotics that affect binding, uptake, and signal transduction.
Proc.Natl.Acad.Sci.USA, 120, 2023
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8B14
 | | T5 Receptor Binding Protein pb5 in complex with its E. coli receptor FhuA | | 分子名称: | DECYLAMINE-N,N-DIMETHYL-N-OXIDE, FhuA iron-ferrichrome transporter, [(2R,3S,4R,5R,6R)-2-[[(2R,4R,5R,6R)-6-[(1R)-1,2-bis(oxidanyl)ethyl]-4-[(2R,4R,5R,6R)-6-[(1R)-1,2-bis(oxidanyl)ethyl]-2-carboxy-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-carboxy-5-oxidanyl-oxan-2-yl]oxymethyl]-5-[[(3R)-3-dodecanoyloxytetradecanoyl]amino]-4-(3-nonanoyloxypropanoyloxy)-6-[[(2R,3S,4R,5R,6R)-3-oxidanyl-4-[(3S)-3-oxidanyltetradecanoyl]oxy-5-[[(3R)-3-oxidanyltridecanoyl]amino]-6-phosphonatooxy-oxan-2-yl]methoxy]oxan-3-yl] phosphate, ... | | 著者 | Degroux, S, Effantin, G, Linares, R, Schoehn, G, Breyton, C. | | 登録日 | 2022-09-09 | | 公開日 | 2023-02-08 | | 最終更新日 | 2024-02-21 | | 実験手法 | ELECTRON MICROSCOPY (2.6 Å) | | 主引用文献 | Deciphering Bacteriophage T5 Host Recognition Mechanism and Infection Trigger.
J.Virol., 97, 2023
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8A60
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8A8C
 | | T5 phage receptor-binding protein pb5 bound to ferrichrome transporter FhuA | | 分子名称: | Ferrichrome outer membrane transporter/phage receptor, Receptor-binding protein pb5, [(2R,3S,4R,5R,6R)-2-[[(2R,4R,5R,6R)-6-[(1R)-1,2-bis(oxidanyl)ethyl]-4-[(2R,4R,5R,6R)-6-[(1R)-1,2-bis(oxidanyl)ethyl]-2-carboxy-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-carboxy-5-oxidanyl-oxan-2-yl]oxymethyl]-5-[[(3R)-3-dodecanoyloxytetradecanoyl]amino]-4-(3-nonanoyloxypropanoyloxy)-6-[[(2R,3S,4R,5R,6R)-3-oxidanyl-4-[(3S)-3-oxidanyltetradecanoyl]oxy-5-[[(3R)-3-oxidanyltridecanoyl]amino]-6-phosphonatooxy-oxan-2-yl]methoxy]oxan-3-yl] phosphate | | 著者 | Silale, A, van den Berg, B. | | 登録日 | 2022-06-22 | | 公開日 | 2022-10-05 | | 最終更新日 | 2022-11-16 | | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | | 主引用文献 | Structural basis for host recognition and superinfection exclusion by bacteriophage T5.
Proc.Natl.Acad.Sci.USA, 119, 2022
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7NSU
 | | ColicinE9 intact translocation complex | | 分子名称: | Colicin-E9, Outer membrane protein F, Tol-Pal system protein TolB, ... | | 著者 | Webby, M.N, Kleanthous, C, Lukoyanova, N, Housden, N.G. | | 登録日 | 2021-03-08 | | 公開日 | 2021-08-11 | | 最終更新日 | 2021-11-17 | | 実験手法 | ELECTRON MICROSCOPY (4.7 Å) | | 主引用文献 | Porin threading drives receptor disengagement and establishes active colicin transport through Escherichia coli OmpF.
Embo J., 40, 2021
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7OBW
 | | Crystal structure of the ferric enterobactin receptor (PfeA) from Pseudomonas aeruginosa in complex with TCV-L6 | | 分子名称: | FE (III) ION, Ferric enterobactin receptor, [4-[[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-[2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]ethanoylamino]propanoyl]amino]propanoyl]amino]methyl]-1,2,3-triazol-1-yl]methyl 4-[4-[(5~{S})-5-(acetamidomethyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]-2-fluoranyl-phenyl]piperazine-1-carboxylate | | 著者 | Moynie, L, Naismith, J.H. | | 登録日 | 2021-04-23 | | 公開日 | 2021-08-04 | | 最終更新日 | 2024-01-31 | | 実験手法 | X-RAY DIFFRACTION (2.66 Å) | | 主引用文献 | Hijacking of the Enterobactin Pathway by a Synthetic Catechol Vector Designed for Oxazolidinone Antibiotic Delivery in Pseudomonas aeruginosa .
Acs Infect Dis., 8, 2022
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6Z9N
 | | Copper transporter OprC | | 分子名称: | COPPER (II) ION, Putative copper transport outer membrane porin OprC | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-04 | | 公開日 | 2021-06-30 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.73 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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6Z9Y
 | | Copper transporter OprC | | 分子名称: | COPPER (II) ION, Putative copper transport outer membrane porin OprC | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-04 | | 公開日 | 2021-06-30 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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6Z91
 | | Copper transporter OprC | | 分子名称: | Putative copper transport outer membrane porin OprC, SILVER ION | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-03 | | 公開日 | 2021-06-30 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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6Z99
 | | Copper transporter OprC | | 分子名称: | Putative copper transport outer membrane porin OprC, SILVER ION | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-03 | | 公開日 | 2021-06-30 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.68 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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6Z8R
 | | Copper transporter OprC | | 分子名称: | COPPER (II) ION, Putative copper transport outer membrane porin OprC | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-02 | | 公開日 | 2021-06-09 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.38 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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6Z8U
 | | Copper transporter OprC | | 分子名称: | Putative copper transport outer membrane porin OprC, SILVER ION | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-02 | | 公開日 | 2021-06-09 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.61 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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6Z8Z
 | | Copper transporter OprC | | 分子名称: | Putative copper transport outer membrane porin OprC | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-02 | | 公開日 | 2021-06-09 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.56 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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6Z8S
 | | Copper transporter OprC | | 分子名称: | COPPER (I) ION, Putative copper transport outer membrane porin OprC | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-02 | | 公開日 | 2021-06-09 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.37 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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6Z8Q
 | | Copper transporter OprC | | 分子名称: | Putative copper transport outer membrane porin OprC, SILVER ION | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-02 | | 公開日 | 2021-06-09 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.71 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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6Z8T
 | | Copper transporter OprC | | 分子名称: | Putative copper transport outer membrane porin OprC, SILVER ION | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-02 | | 公開日 | 2021-06-09 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.86 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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6Z8Y
 | | Copper transporter OprC | | 分子名称: | Putative copper transport outer membrane porin OprC | | 著者 | Bhamidimarri, S.P, van den Berg, B. | | 登録日 | 2020-06-02 | | 公開日 | 2021-06-09 | | 最終更新日 | 2024-01-24 | | 実験手法 | X-RAY DIFFRACTION (2.78 Å) | | 主引用文献 | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
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