PDB: 264 件ウェブページステータス検索Chemie searchBIRD

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1NJZ	CYTOSINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE 分子名称: DNA POLYMERASE I, DNA PRIMER STRAND, DNA TEMPLATE STRAND, ... 著者 Johnson, S.J, Beese, L.S. 登録日 2003-01-02 公開日 2004-03-30 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of mismatch replication errors observed in a DNA polymerase. Cell(Cambridge,Mass.), 116, 2004
1NK9	A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER TWO ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP AND DGTP. 分子名称: DNA POLYMERASE I, DNA PRIMER STRAND, DNA TEMPLATE STRAND, ... 著者 Johnson, S.J, Beese, L.S. 登録日 2003-01-02 公開日 2004-03-30 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structures of mismatch replication errors observed in a DNA polymerase. Cell(Cambridge,Mass.), 116, 2004
1NJW	GUANINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE 分子名称: DNA POLYMERASE I, DNA PRIMER STRAND, DNA TEMPLATE STRAND, ... 著者 Johnson, S.J, Beese, L.S. 登録日 2003-01-02 公開日 2004-03-30 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structures of mismatch replication errors observed in a DNA polymerase. Cell(Cambridge,Mass.), 116, 2004
1NK5	ADENINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE 分子名称: DNA POLYMERASE I, DNA PRIMER STRAND, DNA TEMPLATE STRAND, ... 著者 Johnson, S.J, Beese, L.S. 登録日 2003-01-02 公開日 2004-03-30 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structures of mismatch replication errors observed in a DNA polymerase. Cell(Cambridge,Mass.), 116, 2004
1NK0	ADENINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA POLYMERASE I, DNA PRIMER STRAND, ... 著者 Johnson, S.J, Beese, L.S. 登録日 2003-01-02 公開日 2004-03-30 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structures of mismatch replication errors observed in a DNA polymerase. Cell(Cambridge,Mass.), 116, 2004
1NK7	GUANINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE 分子名称: DNA POLYMERASE I, DNA PRIMER STRAND, DNA TEMPLATE STRAND, ... 著者 Johnson, S.J, Beese, L.S. 登録日 2003-01-02 公開日 2004-03-30 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structures of mismatch replication errors observed in a DNA polymerase. Cell(Cambridge,Mass.), 116, 2004
1NKE	A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A CYTOSINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP. 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA POLYMERASE I, DNA PRIMER STRAND, ... 著者 Johnson, S.J, Beese, L.S. 登録日 2003-01-02 公開日 2004-03-30 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structures of mismatch replication errors observed in a DNA polymerase. Cell(Cambridge,Mass.), 116, 2004
1U49	Adenine-8oxoguanine mismatch at the polymerase active site 分子名称: DNA polymerase I, DNA primer strand, DNA template strand with 8-oxoguanine, ... 著者 Hsu, G.W, Ober, M, Carell, T, Beese, L.S. 登録日 2004-07-23 公開日 2004-09-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase. Nature, 431, 2004
1U48	Extension of a cytosine-8-oxoguanine base pair 分子名称: DNA polymerase I, DNA primer strand, DNA template strand with 8-oxoguanine, ... 著者 Hsu, G.W, Ober, M, Carell, T, Beese, L.S. 登録日 2004-07-23 公開日 2004-09-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase. Nature, 431, 2004
1U45	8oxoguanine at the pre-insertion site of the polymerase active site 分子名称: DNA polymerase I, DNA primer strand, DNA template strand with 8-oxoguanine, ... 著者 Hsu, G.W, Ober, M, Carell, T, Beese, L.S. 登録日 2004-07-23 公開日 2004-09-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase. Nature, 431, 2004
1U4B	Extension of an adenine-8oxoguanine mismatch 分子名称: DNA polymerase I, DNA primer strand, DNA template strand with 8-oxoguanine, ... 著者 Hsu, G.W, Ober, M, Carell, T, Beese, L.S. 登録日 2004-07-23 公開日 2004-09-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase. Nature, 431, 2004
1UA0	Aminofluorene DNA adduct at the pre-insertion site of a DNA polymerase 分子名称: 2-AMINOFLUORENE, DNA polymerase I, DNA primer strand, ... 著者 Hsu, G.W, Kiefer, J.R, Becherel, O.J, Fuchs, R.P.P, Beese, L.S. 登録日 2004-08-11 公開日 2004-09-28 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Observing translesion synthesis of an aromatic amine DNA adduct by a high-fidelity DNA polymerase J.Biol.Chem., 279, 2004
1UA1	Structure of aminofluorene adduct paired opposite cytosine at the polymerase active site. 分子名称: 2-AMINOFLUORENE, DNA polymerase I, DNA primer strand, ... 著者 Hsu, G.W, Kiefer, J.R, Becherel, O.J, Fuchs, R.P.P, Beese, L.S. 登録日 2004-08-11 公開日 2004-09-28 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Observing translesion synthesis of an aromatic amine DNA adduct by a high-fidelity DNA polymerase J.Biol.Chem., 279, 2004
1U47	cytosine-8-Oxoguanine base pair at the polymerase active site 分子名称: DNA polymerase I, DNA primer strand, DNA template strand with 8-oxoguanine, ... 著者 Hsu, G.W, Ober, M, Carell, T, Beese, L.S. 登録日 2004-07-23 公開日 2004-09-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase. Nature, 431, 2004
4DQQ	Ternary complex of Bacillus DNA Polymerase I Large Fragment E658A, DNA duplex, and rCTP (paired with dG of template) in presence of Mg2+ 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CYTIDINE-5'-TRIPHOSPHATE, ... 著者 Wang, W, Beese, L.S. 登録日 2012-02-16 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.595 Å) 主引用文献 Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem., 287, 2012
4DSF	Ternary complex of Bacillus DNA Polymerase I Large Fragment F710Y, DNA duplex, and rCTP (paired with dG of template) in presence of Mn2+ 分子名称: CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DOC))-3'), ... 著者 Wang, W, Beese, L.S. 登録日 2012-02-18 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.661 Å) 主引用文献 Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem., 287, 2012
4DQS	Binary complex of Bacillus DNA Polymerase I Large Fragment and duplex DNA with rC in primer terminus paired with dG of template 分子名称: CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*GP*A*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3'), DNA polymerase, ... 著者 Wang, W, Beese, L.S. 登録日 2012-02-16 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem., 287, 2012
4DSI	Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA, Se-dGTP and Calcium 分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, CALCIUM ION, DNA, ... 著者 Gan, J.H, Abdur, R, Liu, H.H, Sheng, J, Caton-Willians, J, Soares, A.S, Huang, Z. 登録日 2012-02-19 公開日 2013-03-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase To be Published
4DS4	Ternary complex of Bacillus DNA Polymerase I Large Fragment, DNA duplex, and rCTP in presence of Mn2+ 分子名称: DNA (5'-D(*CP*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DOC))-3'), DNA polymerase, ... 著者 Wang, W, Beese, L.S. 登録日 2012-02-17 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.681 Å) 主引用文献 Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem., 287, 2012
4DQR	Ternary complex of Bacillus DNA Polymerase I Large Fragment E658A, DNA duplex, and rCTP (paired with dG of template) in presence of Mn2+ 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3'), ... 著者 Wang, W, Beese, L.S. 登録日 2012-02-16 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem., 287, 2012
4DSK	Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA, PPi and Calcium 分子名称: CALCIUM ION, DNA (5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*CP*G)-3'), DNA (5'-D(*TP*CP*AP*CP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), ... 著者 Gan, J.H, Abdur, R, Liu, H.H, Sheng, J, Caton-Willians, J, Soares, A.S, Huang, Z. 登録日 2012-02-19 公開日 2013-03-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase To be Published
4DSJ	Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA, dGTP and Calcium 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA, ... 著者 Gan, J.H, Abdur, R, Liu, H.H, Sheng, J, Caton-Willians, J, Soares, A.S, Huang, Z. 登録日 2012-02-19 公開日 2013-03-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.86 Å) 主引用文献 Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase To be Published
4DQI	Ternary complex of Bacillus DNA Polymerase I Large Fragment, DNA duplex, and dCTP (paired with dG of template) 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*C*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DOC))-3'), ... 著者 Wang, W, Beese, L.S. 登録日 2012-02-15 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem., 287, 2012
4DS5	Ternary complex of Bacillus DNA Polymerase I Large Fragment, DNA duplex, and rCTP in presence of Mg2+ 分子名称: DNA (5'-D(*CP*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*C)-3'), DNA polymerase, ... 著者 Wang, W, Beese, L.S. 登録日 2012-02-17 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem., 287, 2012
4DSL	Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA and Calcium 分子名称: DNA (5'-D(*G*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*C)-3'), DNA (5'-D(*TP*CP*AP*CP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), DNA polymerase, ... 著者 Gan, J.H, Abdur, R, Liu, H.H, Sheng, J, Caton-Willians, J, Soares, A.S, Huang, Z. 登録日 2012-02-19 公開日 2013-03-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase To be Published

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