Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3ZSE
DownloadVisualize
BU of 3zse by Molmil
3D Structure of a thermophilic family GH11 xylanase from Thermobifida fusca
Descriptor: 1,2-ETHANEDIOL, ENDO-1,4-BETA-XYLANASE, beta-D-xylopyranose-(1-4)-2-deoxy-2-fluoro-alpha-D-xylopyranose
Authors:Lammerts van Bueren, A, Otani, S, Friis, E.P, S Wilson, K, Davies, G.J.
Deposit date:2011-06-27
Release date:2012-02-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Three-Dimensional Structure of a Thermophilic Family Gh11 Xylanase from Thermobifida Fusca.
Acta Crystallogr.,Sect.F, 68, 2012
6QE8
DownloadVisualize
BU of 6qe8 by Molmil
Crystal structure of Aspergillus niger GH11 endoxylanase XynA in complex with xylobiose epoxide activity based probe
Descriptor: (1~{R},3~{S},4~{R},5~{R})-5-[(2~{S},3~{R},4~{S},5~{R})-3,4,5-tris(oxidanyl)oxan-2-yl]oxycyclohexane-1,2,3,4-tetrol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Endo-1,4-beta-xylanase A, ...
Authors:Wu, L, Rowland, R.J, Davies, G.J.
Deposit date:2019-01-07
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Dynamic and Functional Profiling of Xylan-Degrading Enzymes inAspergillusSecretomes Using Activity-Based Probes.
Acs Cent.Sci., 5, 2019
7MGU
DownloadVisualize
BU of 7mgu by Molmil
Improved ligand discovery using micro-beam data collection at the edge of protein crystals
Descriptor: 1,2-ETHANEDIOL, ARGININE, Endo-1,4-beta-xylanase, ...
Authors:Soares, A.S, Jakoncic, J.
Deposit date:2021-04-13
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Improved ligand discovery using micro-beam data collection at the edge of protein crystals
To Be Published
6Y0H
DownloadVisualize
BU of 6y0h by Molmil
High resolution structure of GH11 xylanase from Nectria haematococca
Descriptor: Endo-1,4-beta-xylanase
Authors:Andaleeb, H, Betzel, C, Perbandt, M, Brognaro, H.
Deposit date:2020-02-07
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1 Å)
Cite:High-resolution crystal structure and biochemical characterization of a GH11 endoxylanase from Nectria haematococca.
Sci Rep, 10, 2020
5EJ3
DownloadVisualize
BU of 5ej3 by Molmil
Crystal structure of XlnB2
Descriptor: Endo-1,4-beta-xylanase B
Authors:Couture, J.-F.
Deposit date:2015-11-01
Release date:2016-09-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.314 Å)
Cite:Ligand Binding Enhances Millisecond Conformational Exchange in Xylanase B2 from Streptomyces lividans.
Biochemistry, 55, 2016
2F6B
DownloadVisualize
BU of 2f6b by Molmil
Structural and active site modification studies implicate Glu, Trp and Arg in the activity of xylanase from alkalophilic Bacillus sp. (NCL 87-6-10).
Descriptor: Family 11 Xylanase
Authors:Satyanarayana, L, Balakrishnan, H, Gaikward, S, Suresh, C.G.
Deposit date:2005-11-29
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and active site modification studies implicate Glu, Trp and Arg in the activity of xylanase from alkalophilic Bacillus sp. (NCL 87-6-10).
To be Published
8IH0
DownloadVisualize
BU of 8ih0 by Molmil
Crystal structure of GH11 from Thermoanaerobacterium saccharolyticum
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-02-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Characterization and structural analysis of the endo-1,4-beta-xylanase GH11 from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum useful for lignocellulose saccharification.
Sci Rep, 13, 2023
8IH1
DownloadVisualize
BU of 8ih1 by Molmil
Room temperature structure of GH11 from Thermoanaerobacterium saccharolyticum by serial crystallography
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-02-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization and structural analysis of the endo-1,4-beta-xylanase GH11 from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum useful for lignocellulose saccharification.
Sci Rep, 13, 2023
5HXV
DownloadVisualize
BU of 5hxv by Molmil
The crystal structure of thermostable xylanase mutant
Descriptor: Endo-1,4-beta-xylanase
Authors:Watanabe, M, Ishikawa, K.
Deposit date:2016-01-31
Release date:2016-07-27
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Construction of Thermophilic Xylanase and Its Structural Analysis
Biochemistry, 55, 2016
5K7P
DownloadVisualize
BU of 5k7p by Molmil
MicroED structure of xylanase at 2.3 A resolution
Descriptor: Endo-1,4-beta-xylanase 2, IODIDE ION
Authors:de la Cruz, M.J, Hattne, J, Shi, D, Seidler, P, Rodriguez, J, Reyes, F.E, Sawaya, M.R, Cascio, D, Eisenberg, D, Gonen, T.
Deposit date:2016-05-26
Release date:2017-04-05
Last modified:2024-02-28
Method:ELECTRON CRYSTALLOGRAPHY (2.3 Å)
Cite:Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.
Nat. Methods, 14, 2017
2JIC
DownloadVisualize
BU of 2jic by Molmil
High resolution structure of xylanase-II from one micron beam experiment
Descriptor: XYLANASE-II
Authors:Moukhametzianov, R, Burghammer, M, Edwards, P.C, Petitdemange, S, Popov, D, Fransen, M, Schertler, G.F, Riekel, C.
Deposit date:2007-02-27
Release date:2008-05-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Protein Crystallography with a Micrometre-Sized Synchrotron-Radiation Beam.
Acta Crystallogr.,Sect.D, 64, 2008
5JRM
DownloadVisualize
BU of 5jrm by Molmil
Crystal Structure of a Xylanase at 1.56 Angstroem resolution
Descriptor: Endo-1,4-beta-xylanase, GLYCEROL, SULFATE ION
Authors:Gomez, S, Payne, A.M, Savko, M, Fox, G.C, Shepard, W.E, Fernandez, F.J, Vega, M.C.
Deposit date:2016-05-06
Release date:2017-05-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Crystal Structure of a Xylanase at 1.56 Angstroem resolution
To Be Published
5JRN
DownloadVisualize
BU of 5jrn by Molmil
Crystal Structure of a Xylanase in Complex with a Monosaccharide at 2.84 Angstroem resolution
Descriptor: Endo-1,4-beta-xylanase, GLYCEROL, methyl beta-D-xylopyranoside
Authors:Gomez, S, Payne, A.M, Savko, M, Fox, G.C, Shepard, W.E, Fernandez, F.J, Vega, M.C.
Deposit date:2016-05-06
Release date:2017-05-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.841 Å)
Cite:Crystal Structure of a Xylanase in Complex with a Monosaccharide at 2.84 Angstroem resolution
To Be Published
5K9Y
DownloadVisualize
BU of 5k9y by Molmil
Crystal structure of a thermophilic xylanase A from Bacillus subtilis 1A1 quadruple mutant Q7H/G13R/S22P/S179C
Descriptor: Endo-1,4-beta-xylanase A
Authors:Pinheiro, M.P, Ferreira, T.L, Silva, S.R.B, Fuzo, C.A, Silva, S.R, Lourenzoni, M.R, Vieira, D.S, Ward, R.J, Nonato, M.C.
Deposit date:2016-06-01
Release date:2017-04-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The role of local residue environmental changes in thermostable mutants of the GH11 xylanase from Bacillus subtilis.
Int. J. Biol. Macromol., 97, 2017
2VG9
DownloadVisualize
BU of 2vg9 by Molmil
Crystal structure of Loop Swap mutant of Necallimastix patriciarum Xyn11A
Descriptor: ACETATE ION, BIFUNCTIONAL ENDO-1,4-BETA-XYLANASE A, CADMIUM ION
Authors:Vardakou, M, Dumon, C, Flint, J.E, Murray, J.W, Christakopoulos, P, Weiner, D.P, Juge, N, Lewis, R.J, Gilbert, H.J.
Deposit date:2007-11-09
Release date:2007-12-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Understanding the Structural Basis for Substrate and Inhibitor Recognition in Eukaryotic Gh11 Xylanases.
J.Mol.Biol., 375, 2008
2VUL
DownloadVisualize
BU of 2vul by Molmil
Thermostable mutant of ENVIRONMENTALLY ISOLATED GH11 XYLANASE
Descriptor: DODECAETHYLENE GLYCOL, GH11 XYLANASE, SULFATE ION
Authors:Dumon, C, Varvak, A, Wall, M.A, Flint, J.E, Lewis, R.J, Lakey, J.H, Luginbuhl, P, Healey, S, Todaro, T, Desantis, G, Sun, M, Parra-Gessert, L, Tan, X, Weiner, D.P, Gilbert, H.J.
Deposit date:2008-05-27
Release date:2008-06-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Engineering Hyperthermostability Into a Gh11 Xylanase is Mediated by Subtle Changes to Protein Structure.
J.Biol.Chem., 283, 2008
5TZO
DownloadVisualize
BU of 5tzo by Molmil
Computationally Designed Fentanyl Binder - Fen49*-Complex
Descriptor: CHLORIDE ION, Endo-1,4-beta-xylanase A, N-phenyl-N-[1-(2-phenylethyl)piperidin-4-yl]propanamide, ...
Authors:Bick, M.J, Greisen, P.J, Morey, K.J, Antunes, M.S, La, D, Sankaran, B, Reymond, L, Johnsson, K, Medford, J.I, Baker, D.
Deposit date:2016-11-22
Release date:2017-10-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Computational design of environmental sensors for the potent opioid fentanyl.
Elife, 6, 2017
5TVV
DownloadVisualize
BU of 5tvv by Molmil
Computationally Designed Fentanyl Binder - Fen49* Apo
Descriptor: Endo-1,4-beta-xylanase A, POTASSIUM ION
Authors:Bick, M.J, Greisen, P.J, Morey, K.J, Antunes, A.S, La, D, Sankaran, B, Reymond, L, Johnsson, K, Medford, J.I, Baker, D.
Deposit date:2016-11-10
Release date:2017-10-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Computational design of environmental sensors for the potent opioid fentanyl.
Elife, 6, 2017
5TVY
DownloadVisualize
BU of 5tvy by Molmil
Computationally Designed Fentanyl Binder - Fen49
Descriptor: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, Endo-1,4-beta-xylanase A
Authors:Bick, M.J, Greisen, P.J, Morey, K.J, Antunes, M.S, La, D, Sankaran, B, Reymond, L, Johnsson, K, Medford, J.I, Baker, D.
Deposit date:2016-11-10
Release date:2017-10-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1 Å)
Cite:Computational design of environmental sensors for the potent opioid fentanyl.
Elife, 6, 2017
2NQY
DownloadVisualize
BU of 2nqy by Molmil
Crystal structure of alkaline thermophlic xylanase from Bacillus sp. (NCL 86-6-10) with complex xylotriose: Xylotriose cleaved to xylobiose and xylose
Descriptor: FAMILY 11 XYLANASE, beta-D-xylopyranose, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Satyanarayana, L, Gaikwad, S.M, Balakrishnan, H, Suresh, C.G.
Deposit date:2006-11-01
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of alkaline thermophlic xylanase from Bacillus sp. (NCL 86-6-10) with complex xylotriose: Xylotriose cleaved to xylobiose and xylose
To be Published
1ENX
DownloadVisualize
BU of 1enx by Molmil
STRUCTURAL COMPARISON OF TWO MAJOR ENDO-1,4-BETA-XYLANASES FROM TRICHODREMA REESEI
Descriptor: ENDO-1,4-BETA-XYLANASE II
Authors:Rouvinen, J, Torronen, A.
Deposit date:1994-11-14
Release date:1995-08-08
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural comparison of two major endo-1,4-xylanases from Trichoderma reesei.
Biochemistry, 34, 1995
1F5J
DownloadVisualize
BU of 1f5j by Molmil
CRYSTAL STRUCTURE OF XYNB, A HIGHLY THERMOSTABLE BETA-1,4-XYLANASE FROM DICTYOGLOMUS THERMOPHILUM RT46B.1, AT 1.8 A RESOLUTION
Descriptor: BETA-1,4-XYLANASE, SULFATE ION
Authors:McCarthy, A.A, Baker, E.N.
Deposit date:2000-07-26
Release date:2000-11-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of XynB, a highly thermostable beta-1,4-xylanase from Dictyoglomus thermophilum Rt46B.1, at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
2Z79
DownloadVisualize
BU of 2z79 by Molmil
High resolution crystal structure of a glycoside hydrolase family 11 xylanase of Bacillus subtilis
Descriptor: Endo-1,4-beta-xylanase A, GLYCEROL
Authors:Vandermarliere, E, Bourgois, T.M, Strelkov, S.V, Delcour, J.A, Courtin, C.M, Rabijns, A.
Deposit date:2007-08-16
Release date:2007-12-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystallographic analysis shows substrate binding at the -3 to +1 active-site subsites and at the surface of glycoside hydrolase family 11 endo-1,4-beta-xylanases.
Biochem.J., 410, 2008
1H4G
DownloadVisualize
BU of 1h4g by Molmil
Oligosaccharide-binding to family 11 xylanases: both covalent intermediate and mutant-product complexes display 2,5B conformations at the active-centre
Descriptor: SULFATE ION, XYLANASE, beta-D-xylopyranose-(1-4)-2-deoxy-2-fluoro-alpha-D-xylopyranose
Authors:Sabini, E, Wilson, K.S, Danielsen, S, Schulein, M, Davies, G.J.
Deposit date:2001-05-11
Release date:2002-05-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Catalysis and Specificity in Enzymatic Glycoside Hydrolysis: A 2,5B Conformation for the Glycosyl-Enzyme Intermediate Revealed by the Structure of the Bacillus Agaradhaerens Family 11 Xylanase.
Chem.Biol., 6, 1999
2QZ3
DownloadVisualize
BU of 2qz3 by Molmil
Crystal structure of a glycoside hydrolase family 11 xylanase from Bacillus subtilis in complex with xylotetraose
Descriptor: ACETIC ACID, Endo-1,4-beta-xylanase A, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Vandermarliere, E, Bourgois, T.M, Strelkov, S.V, Delcour, J.A, Courtin, C.M, Rabijns, A.
Deposit date:2007-08-16
Release date:2007-12-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic analysis shows substrate binding at the -3 to +1 active-site subsites and at the surface of glycoside hydrolase family 11 endo-1,4-beta-xylanases.
Biochem.J., 410, 2008

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon